Eikenella corrodens CC92I

Gram-negativeFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Eikenella

Description

Eikenella corrodens CC92I is a Gram-negative, facultative anaerobic bacterium that is part of the normal flora of the human mouth and gastrointestinal tract. This microbe is known for its ability to thrive in both aerobic and anaerobic environments, allowing it to adapt to various conditions encountered within the human body. Eikenella corrodens is characterized by its slow growth rate and the production of a distinctive brown pigment when cultured under specific conditions. As a member of the HACEK group, which includes other fastidious organisms, E. corrodens requires specific nutrients for optimal growth, highlighting its specialized metabolic capabilities. Its Gram-negative cell wall structure contributes to its resilience against certain antibiotics, a trait that is relevant for clinical considerations when treating infections associated with this organism. Eikenella corrodens is often involved in polymicrobial infections, particularly in contexts where tissue damage allows for its entry into sterile sites of the body. Its presence in the oral cavity suggests a potential role in oral and systemic health, implicating it in both commensal relationships and disease processes. An intriguing aspect of Eikenella corrodens CC92I is its metabolic versatility, which may enable it to play a role in biogeochemical cycles within the human microbiome. This adaptability underscores the importance of understanding microbial interactions and functions within complex ecosystems, particularly in relation to human health and disease.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusEikenella
SpeciesEikenella corrodens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Eikenella corrodens CC92I

Accession NumberAZGQ00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2068 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinHMPREF1177_00030Not Available+27315 - 2773416058.4
hypothetical proteinHMPREF1177_00031Not Available-27811 - 2853926891.9
ribosomal rna small subunit methyltransferase aHMPREF1177_00032Not Available-28602 - 2938128955.0
hypothetical proteinHMPREF1177_00033Not Available-29924 - 3090134091.8
hypothetical proteinHMPREF1177_00034Not Available-31376 - 3242237075.9
cytochrome c-type biogenesis protein ccsbHMPREF1177_00035Not Available-33569 - 3480146363.5
hypothetical proteinHMPREF1177_00036Not Available-34788 - 3682475885.8
succinyldiaminopimelate transaminaseHMPREF1177_00037Not Available-37203 - 3839643436.2
hypothetical proteinHMPREF1177_00038Not Available-38765 - 389597138.03
hypothetical proteinHMPREF1177_00039Not Available-38956 - 3972328090.7

Displaying genes 71 – 80 of 2160 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

324 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da

Displaying 1–10 of 324 metabolites