Lactobacillus hamsteri DSM 5661 = JCM 6256 strain DSM 5661

Rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Lactobacillus

Description

Lactobacillus hamsteri DSM 5661, also designated as JCM 6256, is a rod-shaped bacterium belonging to the genus Lactobacillus. This strain is primarily found in the intestine, indicating its role in the gut microbiome. Lactobacillus hamsteri DSM 5661 is anaerobic, meaning it thrives in environments devoid of oxygen, which is characteristic of many gut-dwelling microorganisms. The bacterium possesses true flagella, which are motor appendages that may aid in its mobility within the intestinal environment. The presence of flagella can facilitate the bacterium's ability to navigate the dense and complex ecosystem of the gut. Lactobacillus hamsteri DSM 5661 has one replicon, which is indicative of its genetic organization. Its genomic information can be accessed through the accession number AZGI00000000.1, which provides a resource for further studies on its genetic makeup, metabolic pathways, and potential interactions within the gut microbiome. The ecological insight of Lactobacillus hamsteri DSM 5661 lies in its adaptation to the anaerobic conditions of the intestine and its potential contributions to gut health. As a member of the Lactobacillus genus, it may play a role in fermentation processes, production of lactic acid, and maintenance of gut homeostasis, thus contributing to the overall health of the host organism.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLactobacillus
SpeciesLactobacillus hamsteri
StrainDSM 5661 = JCM 6256 strain DSM 5661

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Lactobacillus hamsteri DSM 5661 = JCM 6256 strain DSM 5661
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatintestine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lactobacillus hamsteri DSM 5661 = JCM 6256 strain DSM 5661

Gene Summary

Adenine Count

594540 bp

Thymine Count

598426 bp

Guanine Count

314767 bp

Cytosine Count

329793 bp

Genome Length

1837804 bp

Protein-coding Genes

1674 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinFC39_GL000955Not AvailablePositive1076649 - 107715219573.8
coenzyme a biosynthesis bifunctional protein coabcFC39_GL000957Not AvailablePositive1077281 - 107845042627.9
cof family proteinFC39_GL000958Not AvailablePositive1078795 - 107960429946.1
d-isomer specific 2-hydroxyacid dehydrogenase, nad-binding proteinFC39_GL000959Not AvailablePositive1079684 - 108064935417.6
amino acid permeaseFC39_GL000960Not AvailableNegative1080724 - 108210949809.7
alkaline phosphataseFC39_GL000961Not AvailableNegative1082130 - 108274423291.3
excision endonuclease subunit uvrcFC39_GL000962Not AvailablePositive1082880 - 108469169687.3
gtpase obgFC39_GL000963Not AvailablePositive1084772 - 108607947765.1
acyltransferase family proteinFC39_GL000964Not AvailablePositive1086119 - 108803872954.5
ribonuclease zFC39_GL000965Not AvailablePositive1088051 - 108898934662.8

Displaying genes 1091 – 1100 of 1774 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.