Secundilactobacillus kimchicus JCM 15530

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Secundilactobacillus

Description

Secundilactobacillus kimchicus JCM 15530 is a species of lactic acid bacteria characterized by having a single replicon, indicating a streamlined genomic structure. The accession number for its genomic data is AZCX00000000.1, which allows for the retrieval of its genetic information for further study. This bacterium is notable for its potential applications in fermentation processes, particularly in the production of fermented foods. As a member of the lactic acid bacteria group, Secundilactobacillus kimchicus may play a role in the fermentation of kimchi, a traditional Korean dish known for its health benefits and preservation qualities. The presence of such bacteria in fermented foods contributes to their flavor profile and nutritional value, as they are involved in the production of lactic acid and other metabolites. From a biological perspective, the single replicon of Secundilactobacillus kimchicus suggests a potential efficiency in replicative processes and genetic regulation, which may be advantageous for its survival in competitive environments such as those found in fermented food matrices. This trait can provide insights into the adaptability and resilience of lactic acid bacteria within ecological niches where fermentation occurs. Understanding the characteristics of Secundilactobacillus kimchicus can enhance our knowledge of microbial diversity and functionality in food systems, contributing to better fermentation practices and the potential development of probiotic applications.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusSecundilactobacillus
SpeciesSecundilactobacillus kimchicus
StrainJCM 15530

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Secundilactobacillus kimchicus JCM 15530 Scaffold45, whole genome

Gene Summary

Adenine Count

691261 bp

Thymine Count

693906 bp

Guanine Count

622596 bp

Cytosine Count

585503 bp

Genome Length

2593269 bp

Protein-coding Genes

2404 genes

Non-Coding Genes

114 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent zn proteaseFC96_GL000804Not AvailablePositive2410415 - 241248475442.9
hsp33-like chaperoninFC96_GL000805Not AvailablePositive2412618 - 241350831676.8
nifr3 family tim-barrel proteinFC96_GL000806Not AvailablePositive2413603 - 241459836536.0
lysyl-trna synthetaseFC96_GL000807Not AvailablePositive2414692 - 241618857417.8
menaquinone-specific isochorismate synthaseFC96_GL000808Not AvailablePositive2416750 - 241804546712.3
menaquinone biosynthesis protein mendFC96_GL000809Not AvailablePositive2418477 - 242019861612.1
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxy late synthaseFC96_GL000810Not AvailablePositive2420221 - 242100628570.6
n-acylamino acid racemaseFC96_GL000811Not AvailablePositive2420993 - 242210540495.3
molecular chaperone (small heat shock protein)FC96_GL000812Not AvailablePositive2422261 - 242268616274.8
cell surface hydrolaseFC96_GL000813Not AvailablePositive2422835 - 242464363025.0

Displaying genes 2351 – 2360 of 2518 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.