Secundilactobacillus kimchicus JCM 15530

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Secundilactobacillus

Description

Secundilactobacillus kimchicus JCM 15530 is a species of lactic acid bacteria characterized by having a single replicon, indicating a streamlined genomic structure. The accession number for its genomic data is AZCX00000000.1, which allows for the retrieval of its genetic information for further study. This bacterium is notable for its potential applications in fermentation processes, particularly in the production of fermented foods. As a member of the lactic acid bacteria group, Secundilactobacillus kimchicus may play a role in the fermentation of kimchi, a traditional Korean dish known for its health benefits and preservation qualities. The presence of such bacteria in fermented foods contributes to their flavor profile and nutritional value, as they are involved in the production of lactic acid and other metabolites. From a biological perspective, the single replicon of Secundilactobacillus kimchicus suggests a potential efficiency in replicative processes and genetic regulation, which may be advantageous for its survival in competitive environments such as those found in fermented food matrices. This trait can provide insights into the adaptability and resilience of lactic acid bacteria within ecological niches where fermentation occurs. Understanding the characteristics of Secundilactobacillus kimchicus can enhance our knowledge of microbial diversity and functionality in food systems, contributing to better fermentation practices and the potential development of probiotic applications.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusSecundilactobacillus
SpeciesSecundilactobacillus kimchicus
StrainJCM 15530

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Secundilactobacillus kimchicus JCM 15530 Scaffold45, whole genome

Gene Summary

Adenine Count

691261 bp

Thymine Count

693906 bp

Guanine Count

622596 bp

Cytosine Count

585503 bp

Genome Length

2593269 bp

Protein-coding Genes

2404 genes

Non-Coding Genes

114 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
integraseFC96_GL001464Not AvailableNegative997571 - 99827526905.4
type ic specificity subunit proteinFC96_GL001465Not AvailableNegative998611 - 99981645982.6
site-specific dna-methyltransferase (adenine-specific), hsdm subunitFC96_GL001466Not AvailableNegative999813 - 100140860117.7
type i site-specific deoxyribonuclease, hsdr subunitFC96_GL001467Not AvailableNegative1001429 - 1004320111321.0
3-oxoacyl-acyl carrier protein reductaseFC96_GL001468Not AvailableNegative1005366 - 100613626718.5
s-ribosylhomocysteinaseFC96_GL001469Not AvailableNegative1006149 - 100663417770.2
d-methionine abc transporter, substrate binding proteinFC96_GL001470Not AvailableNegative1006640 - 100750031306.6
amino acid abc transporter, permease proteinFC96_GL001471Not AvailableNegative1007514 - 100818524004.2
abc superfamily atp binding cassette transporter, binding proteinFC96_GL001472Not AvailableNegative1008185 - 100925838784.9
hypothetical proteinFC96_GL001473Not AvailableNegative1009258 - 100973717328.6

Displaying genes 1041 – 1050 of 2518 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.