Lactobacillus crispatus DSM 20584 = JCM 1185 = ATCC 33820 strain

Gram-positiveRodNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Lactobacillus

Description

Lactobacillus crispatus DSM 20584 (also known as JCM 1185 and ATCC 33820) is a Gram-positive, rod-shaped bacterium that is categorized as a facultative anaerobe. This strain is notable for its non-motility, lacking flagella, and typically arranges itself in chains. The optimal growth temperature for L. crispatus is 37°C, indicating its mesophilic nature, which aligns with the typical body temperature of its hosts. This bacterium is primarily host-associated and exhibits a free-living biotic relationship. It has been identified in various hosts, including Homo sapiens (humans), Gallus gallus (domestic chickens), Aves (birds), and Olea europaea (olive trees). The presence of L. crispatus in these diverse hosts suggests its ecological versatility and potential roles in different biological systems. L. crispatus is characterized by a single replicon and possesses one membrane. It does not undergo sporulation, which may influence its survival strategies in various environments. The strain is cataloged under the accession number AZCW00000000.1, highlighting its recognized genetic profile. In summary, Lactobacillus crispatus DSM 20584's traits, such as its facultative anaerobic metabolism and association with diverse hosts, underscore its ecological adaptability. Its presence in both animal and plant hosts may reflect its roles in gut health and fermentation processes, contributing to the microbiomes of these organisms.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLactobacillus
SpeciesLactobacillus crispatus
StrainDSM 20584 = JCM 1185 = ATCC 33820 strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Lactobacillus crispatus DSM 20584 = JCM 1185 = ATCC 33820 strain
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lactobacillus crispatus DSM 20584 = JCM 1185 = ATCC 33820 strain


Gene Summary

Adenine Count

647201 bp

Thymine Count

656706 bp

Guanine Count

368323 bp

Cytosine Count

384143 bp

Genome Length

2057071 bp

Protein-coding Genes

1967 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinFC28_GL000001Not AvailablePositive377 - 6229650.49
abc transporter atpaseFC28_GL000002Not AvailablePositive644 - 218559386.3
abc transporter atp binding and permease proteinFC28_GL000003Q5V225Positive2584 - 377144238.1
abc transporter atp binding and permeaseFC28_GL000004Q57538Positive3935 - 533552755.4
phosphoenolpyruvate carboxykinase (atp)FC28_GL000005Not AvailableNegative5430 - 708862837.8
hypothetical proteinFC28_GL000006Not AvailablePositive7264 - 911472161.9
biotin carboxylaseFC28_GL000007Not AvailablePositive9119 - 1044750365.4
atp-dependent helicaseFC28_GL000008P50830Positive10457 - 1269484974.7
hypothetical proteinFC28_GL000009Not AvailablePositive12740 - 1311114071.0
nitro flavin reductaseFC28_GL000010Q49UU0Positive13191 - 1399430947.9

Displaying genes 1 – 10 of 2014 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

71 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm00007131,5-anhydro-D-fructoseC6H10O5Chemical structure of 1,5-anhydro-D-fructoseNot available
Average162.1406Da
Monoisotopic162.05282343Da
BASm00008652-oxooctadecanoateC18H33O3Chemical structure of 2-oxooctadecanoateNot available
Average297.46Da
Monoisotopic297.2435185Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001358lactateC3H5O3Chemical structure of lactateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da

Displaying 1–10 of 71 metabolites

Health Effects

No health effects information available for this bacterium.