Ligilactobacillus agilis DSM 20509

Gram-positiveRod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Ligilactobacillus

Description

Ligilactobacillus agilis DSM 20509 is a Gram-positive bacterium characterized by its rod-shaped morphology. This species is notable for possessing flagella, which may contribute to its motility and ecological interactions. Ligilactobacillus agilis has a single replicon, indicating a streamlined genomic structure conducive to its survival and replication. The strain is cataloged under the accession number AYYP00000000.1, which serves as a unique identifier in genomic databases, facilitating research and study. Its classification within the Ligilactobacillus genus suggests potential roles in fermentation processes, particularly in dairy and plant-based substrates, where lactic acid bacteria are commonly implicated. From a biological perspective, the presence of flagella in Ligilactobacillus agilis may enhance its ability to colonize specific niches within its environment, possibly aiding in the establishment of microbial communities. This motility can be crucial for the bacterium's adaptation to variable conditions, improving its competitive advantage over other microbial species. Understanding the ecological role of Ligilactobacillus agilis and its interactions can provide insights into the dynamics of microbial communities, particularly in environments where lactic acid bacteria play a significant role in maintaining ecosystem balance and contributing to nutrient cycling.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLigilactobacillus
SpeciesLigilactobacillus agilis
StrainDSM 20509

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ligilactobacillus agilis DSM 20509
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ligilactobacillus agilis DSM 20509


Gene Summary

Adenine Count

608308 bp

Thymine Count

589985 bp

Guanine Count

444987 bp

Cytosine Count

413691 bp

Genome Length

2058058 bp

Protein-coding Genes

1897 genes

Non-Coding Genes

134 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinFC14_GL000611Not AvailableNegative1649460 - 165009824235.3
hypothetical proteinFC14_GL000612Not AvailableNegative1650111 - 165054516347.4
Minor capsid proteinFC14_GL000613Not AvailableNegative1650607 - 165118520152.3
Minor capsid proteinFC14_GL000614Not AvailableNegative1651198 - 165158714286.9
Minor capsid proteinFC14_GL000616Q38582Negative1652705 - 165373936848.9
Minor capsid proteinFC14_GL000617Q04763Negative1653755 - 165437523047.0
Minor capsid proteinFC14_GL000619Q04765Negative1654771 - 165643263450.4
Minor capsid proteinFC14_GL000620Not AvailableNegative1656404 - 165798459300.2
Putative terminase large subunitFC14_GL000621Not AvailableNegative1657998 - 165889134920.6
Putative terminase small subunitFC14_GL000622P39785Negative1659298 - 166013732122.7

Displaying genes 51 – 60 of 2031 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

98 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001358lactateC3H5O3Chemical structure of lactateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da

Displaying 1–10 of 98 metabolites

Health Effects

No health effects information available for this bacterium.