Frankia sp. CcI6

Gram-positiveFilamentous

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Frankia

Description

Frankia sp. CcI6 is a Gram-positive, filamentous bacterium. It is characterized by having a single replicon, which indicates a simpler genomic organization compared to some other bacterial species that may possess multiple replicons. The accession number for this strain is AYTZ00000000.1, which can be used to reference its genetic information in databases. As a member of the genus Frankia, this bacterium is known for its ability to form symbiotic relationships with certain plants, particularly within the actinorhizal group. These associations are ecologically significant because they enable the host plants to access nitrogen from the atmosphere, thereby enhancing soil fertility. This nitrogen-fixing capability is essential for ecosystems, especially in nitrogen-poor environments. Frankia sp. CcI6, like other species of Frankia, likely plays a crucial role in nutrient cycling and plant growth in its native habitat. The filamentous shape of this bacterium may also contribute to its ability to colonize plant roots and form stable associations. As such, understanding the traits and behaviors of Frankia sp. CcI6 can provide insights into its ecological role and potential applications in agriculture and ecosystem management.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusFrankia
SpeciesFrankia sp. CcI6
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeFilamentous
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Frankia sp. CcI6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frankia sp. CcI6 CcI6DRAFT_scaffold_137.138, whole genome shotgun

Gene Summary

Adenine Count

809690 bp

Thymine Count

807359 bp

Guanine Count

1885143 bp

Cytosine Count

1886827 bp

Genome Length

5578623 bp

Protein-coding Genes

4900 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane protease ftsh catalytic subunitCcI6DRAFT_02007Not AvailablePositive2294687 - 229694880534.4
gtp cyclohydrolase iCcI6DRAFT_02008Not AvailablePositive2297026 - 229767923772.5
atp phosphoribosyltransferase (homohexameric)CcI6DRAFT_02009Not AvailableNegative2297696 - 229854730337.8
phosphoribosyl-atp pyrophosphataseCcI6DRAFT_02010Not AvailableNegative2298585 - 229899214616.5
putative had superfamily hydrolaseCcI6DRAFT_02011Not AvailablePositive2299067 - 229987927937.7
putative zn-dependent protease-like proteinCcI6DRAFT_02012Not AvailablePositive2300172 - 230174056024.7
putative zn-dependent protease-like proteinCcI6DRAFT_02013Not AvailablePositive2301788 - 230327252008.6
hypothetical proteinCcI6DRAFT_02014Not AvailableNegative2303401 - 230397320616.5
zn-dependent oxidoreductase, nadph:quinone reductaseCcI6DRAFT_02015Not AvailableNegative2304055 - 230503833564.7
dna-directed rna polymerase specialized sigma subunit, sigma24CcI6DRAFT_02016Not AvailablePositive2305968 - 230674127997.2

Displaying genes 2011 – 2020 of 4962 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.