Frankia sp. CcI6

Gram-positiveFilamentous

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Frankia

Description

Frankia sp. CcI6 is a Gram-positive, filamentous bacterium. It is characterized by having a single replicon, which indicates a simpler genomic organization compared to some other bacterial species that may possess multiple replicons. The accession number for this strain is AYTZ00000000.1, which can be used to reference its genetic information in databases. As a member of the genus Frankia, this bacterium is known for its ability to form symbiotic relationships with certain plants, particularly within the actinorhizal group. These associations are ecologically significant because they enable the host plants to access nitrogen from the atmosphere, thereby enhancing soil fertility. This nitrogen-fixing capability is essential for ecosystems, especially in nitrogen-poor environments. Frankia sp. CcI6, like other species of Frankia, likely plays a crucial role in nutrient cycling and plant growth in its native habitat. The filamentous shape of this bacterium may also contribute to its ability to colonize plant roots and form stable associations. As such, understanding the traits and behaviors of Frankia sp. CcI6 can provide insights into its ecological role and potential applications in agriculture and ecosystem management.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusFrankia
SpeciesFrankia sp. CcI6
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeFilamentous
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Frankia sp. CcI6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frankia sp. CcI6 CcI6DRAFT_scaffold_137.138, whole genome shotgun

Gene Summary

Adenine Count

809690 bp

Thymine Count

807359 bp

Guanine Count

1885143 bp

Cytosine Count

1886827 bp

Genome Length

5578623 bp

Protein-coding Genes

4900 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleoside-diphosphate-sugar epimeraseCcI6DRAFT_01694Not AvailableNegative1941508 - 194336765595.7
glycosyltransferaseCcI6DRAFT_01695Not AvailableNegative1943364 - 194468947440.5
udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferaseCcI6DRAFT_01696Not AvailableNegative1944859 - 194609741893.1
hypothetical proteinCcI6DRAFT_01697Not AvailablePositive1946377 - 194865378584.5
hypothetical proteinCcI6DRAFT_01698Not AvailablePositive1948700 - 19489488757.65
putative acyltransferaseCcI6DRAFT_01699Not AvailablePositive1949180 - 195041545793.5
crispr-associated helicase, cas3 familyCcI6DRAFT_01700Not AvailablePositive1950708 - 1953560101862.0
crispr-associated protein, cse1 familyCcI6DRAFT_01701Not AvailablePositive1953923 - 195557560249.1
crispr-associated protein, cse2 familyCcI6DRAFT_01702Not AvailablePositive1955602 - 195622222944.8
crispr-associated protein, cse4 familyCcI6DRAFT_01703Not AvailablePositive1956301 - 195745541425.4

Displaying genes 1701 – 1710 of 4962 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.