Rhodonellum psychrophilum GCM71 = DSM 17998 strain GCM71 EFN26GC9

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cytophagaceae

Genus

Rhodonellum

Description

Rhodonellum psychrophilum GCM71, also designated as DSM 17998 strain GCM71 EFN26GC9, is a psychrophilic bacterium characterized by its adaptation to cold environments. This strain possesses a single replicon, which is significant for its genomic stability and replication processes. The complete genomic sequence of this strain is stored under the accession number AWXR00000000.1, providing a valuable resource for further study of its genetic makeup and functional capabilities. As a psychrophile, Rhodonellum psychrophilum thrives in low-temperature habitats, which may include polar regions, deep-sea environments, or other cold ecosystems. This adaptation is crucial for survival in such extreme conditions, influencing its metabolic pathways and ecological interactions. The unique traits of Rhodonellum psychrophilum, particularly its ability to function optimally at low temperatures, highlight its potential applications in biotechnology, such as in cold-adapted enzymes for industrial processes. Understanding the physiological and genetic characteristics of Rhodonellum psychrophilum GCM71 can provide insights into microbial diversity in cold environments and contribute to the exploration of microbial life in extreme habitats. Its ecological role could be significant in nutrient cycling and interactions within microbial communities, demonstrating the importance of psychrophilic organisms in maintaining ecosystem balance in cold ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCytophagaceae
GenusRhodonellum
SpeciesRhodonellum psychrophilum
StrainGCM71 = DSM 17998 strain GCM71 EFN26GC9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodonellum psychrophilum GCM71 = DSM 17998 strain GCM71 EFN26GC9,

Gene Summary

Adenine Count

1489513 bp

Thymine Count

1499698 bp

Guanine Count

1087843 bp

Cytosine Count

1060093 bp

Genome Length

5137147 bp

Protein-coding Genes

4894 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinate dehydrogenaseP872_19255Not AvailablePositive3406327 - 340826171702.3
succinate dehydrogenaseP872_19260Not AvailablePositive3408290 - 340903927261.6
sodium:solute symporterP872_19265Not AvailablePositive3409244 - 341066851734.7
gnat family acetyltransferaseP872_19270Not AvailablePositive3410681 - 341112116378.8
amino acid racemaseP872_19275Not AvailablePositive3411206 - 341220137148.6
hypothetical proteinP872_19280Not AvailablePositive3412304 - 341290621684.4
hypothetical proteinP872_19285Not AvailablePositive3413036 - 341360520947.3
crossover junction endodeoxyribonuclease ruvcP872_19290Not AvailableNegative3413630 - 341420821260.1
hypothetical proteinP872_19295Not AvailablePositive3414290 - 341535139794.6
hypothetical proteinP872_19300Not AvailablePositive3415374 - 34156259797.71

Displaying genes 3281 – 3290 of 4941 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.