Rhodonellum psychrophilum GCM71 = DSM 17998 strain GCM71 EFN26GC9

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cytophagaceae

Genus

Rhodonellum

Description

Rhodonellum psychrophilum GCM71, also designated as DSM 17998 strain GCM71 EFN26GC9, is a psychrophilic bacterium characterized by its adaptation to cold environments. This strain possesses a single replicon, which is significant for its genomic stability and replication processes. The complete genomic sequence of this strain is stored under the accession number AWXR00000000.1, providing a valuable resource for further study of its genetic makeup and functional capabilities. As a psychrophile, Rhodonellum psychrophilum thrives in low-temperature habitats, which may include polar regions, deep-sea environments, or other cold ecosystems. This adaptation is crucial for survival in such extreme conditions, influencing its metabolic pathways and ecological interactions. The unique traits of Rhodonellum psychrophilum, particularly its ability to function optimally at low temperatures, highlight its potential applications in biotechnology, such as in cold-adapted enzymes for industrial processes. Understanding the physiological and genetic characteristics of Rhodonellum psychrophilum GCM71 can provide insights into microbial diversity in cold environments and contribute to the exploration of microbial life in extreme habitats. Its ecological role could be significant in nutrient cycling and interactions within microbial communities, demonstrating the importance of psychrophilic organisms in maintaining ecosystem balance in cold ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCytophagaceae
GenusRhodonellum
SpeciesRhodonellum psychrophilum
StrainGCM71 = DSM 17998 strain GCM71 EFN26GC9

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodonellum psychrophilum GCM71 = DSM 17998 strain GCM71 EFN26GC9,

Gene Summary

Adenine Count

1489513 bp

Thymine Count

1499698 bp

Guanine Count

1087843 bp

Cytosine Count

1060093 bp

Genome Length

5137147 bp

Protein-coding Genes

4894 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction dna helicase ruvbP872_02245Not AvailableNegative1278998 - 128019144147.2
hypothetical proteinP872_02250Not AvailablePositive1280191 - 128125839254.1
zinc permeaseP872_02255Not AvailablePositive1281251 - 128203328610.3
transposaseP872_02260Not AvailablePositive1282168 - 128259016474.4
short chain amide porinP872_02265Not AvailablePositive1282769 - 128417852098.6
rna polymerase subunit sigma-32P872_02270Not AvailablePositive1284193 - 128445610379.9
sodium:solute symporterP872_02275Not AvailablePositive1284482 - 128618560551.5
hypothetical proteinP872_02280Not AvailablePositive1286298 - 12865078121.4
histidine kinaseP872_02285Not AvailablePositive1286500 - 1289241102438.0
chemotaxis protein cheyP872_02290Not AvailablePositive1289234 - 128959013431.7

Displaying genes 1271 – 1280 of 4941 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.