Porphyromonas sp. oral taxon 278 str. W7784

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Porphyromonas

Description

Porphyromonas sp. oral taxon 278 str. W7784 is characterized as a rod-shaped bacterium, which is a significant morphological trait. The presence of flagella indicates that this microorganism may exhibit motility, potentially influencing its behavior and interaction within the oral microbiome. This is particularly relevant given the complex ecosystem of microorganisms in the oral cavity. The genomic characterization of Porphyromonas sp. oral taxon 278 includes a single replicon, which suggests a streamlined genetic organization that may contribute to its adaptability in various environments, including the human oral cavity. The accession number AWUX00000000.1 serves as a reference for researchers seeking to explore its genomic information further. In the context of microbiology, the traits of Porphyromonas sp. oral taxon 278 str. W7784 underscore its potential role in oral health or disease. The presence of flagella could facilitate its colonization and movement in the biofilms that form on teeth and gums, while its rod shape is typical of many bacteria found in the oral environment. Understanding this bacterium's traits can provide insights into its ecological role, particularly in relation to other microbial species in the oral microbiome and its possible implications for oral health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPorphyromonadaceae
GenusPorphyromonas
SpeciesPorphyromonas sp. oral taxon 278
StrainW7784

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonas sp. oral taxon 278 str. W7784

Gene Summary

Adenine Count

474321 bp

Thymine Count

481623 bp

Guanine Count

606910 bp

Cytosine Count

592580 bp

Genome Length

2155434 bp

Protein-coding Genes

1984 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxamine 5'-phosphate oxidaseHMPREF1556_02004Not AvailablePositive2110316 - 211096624874.5
putative tyrosine recombinase xercHMPREF1556_02005Not AvailablePositive2110981 - 211191034709.5
hypothetical proteinHMPREF1556_02006Not AvailablePositive2111929 - 211352759339.6
crispr-associated endonuclease cas3-hdHMPREF1556_02007Not AvailablePositive2113893 - 211622388615.7
crispr-associated protein cas5, dvulg subtypeHMPREF1556_02008Not AvailablePositive2116254 - 211694327018.7
crispr-associated protein, csd1 familyHMPREF1556_02009Not AvailablePositive2116940 - 211884471763.2
hypothetical proteinHMPREF1556_02010Not AvailablePositive2118868 - 211973132153.3
crispr-associated protein cas4HMPREF1556_02011Not AvailablePositive2119738 - 212040625597.4
hypothetical proteinHMPREF1556_02012Not AvailableNegative2120411 - 21205364765.69
crispr-associated endonuclease cas1, dvulg subtypeHMPREF1556_02013Not AvailablePositive2120683 - 212171139012.6

Displaying genes 2001 – 2010 of 2038 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.