Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | Porphyromonas |
| Species | Porphyromonas sp. oral taxon 278 |
| Strain | W7784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
474321 bp
Thymine Count
481623 bp
Guanine Count
606910 bp
Cytosine Count
592580 bp
Genome Length
2155434 bp
Protein-coding Genes
1984 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | HMPREF1556_02004 | Not Available | Positive | 2110316 - 2110966 | 24874.5 |
| putative tyrosine recombinase xerc | HMPREF1556_02005 | Not Available | Positive | 2110981 - 2111910 | 34709.5 |
| hypothetical protein | HMPREF1556_02006 | Not Available | Positive | 2111929 - 2113527 | 59339.6 |
| crispr-associated endonuclease cas3-hd | HMPREF1556_02007 | Not Available | Positive | 2113893 - 2116223 | 88615.7 |
| crispr-associated protein cas5, dvulg subtype | HMPREF1556_02008 | Not Available | Positive | 2116254 - 2116943 | 27018.7 |
| crispr-associated protein, csd1 family | HMPREF1556_02009 | Not Available | Positive | 2116940 - 2118844 | 71763.2 |
| hypothetical protein | HMPREF1556_02010 | Not Available | Positive | 2118868 - 2119731 | 32153.3 |
| crispr-associated protein cas4 | HMPREF1556_02011 | Not Available | Positive | 2119738 - 2120406 | 25597.4 |
| hypothetical protein | HMPREF1556_02012 | Not Available | Negative | 2120411 - 2120536 | 4765.69 |
| crispr-associated endonuclease cas1, dvulg subtype | HMPREF1556_02013 | Not Available | Positive | 2120683 - 2121711 | 39012.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


