Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Comamonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Comamonas |
| Species | Comamonas thiooxydans |
| Strain | strain DF2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | activated sludge; human gut; human intestinal tract |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1087055 bp
Thymine Count
1092981 bp
Guanine Count
1714477 bp
Cytosine Count
1713230 bp
Genome Length
5607743 bp
Protein-coding Genes
5129 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-denpendent receptor | P608_02245 | Not Available | Negative | 476567 - 478588 | 74712.5 |
| urease subunit gamma | P608_02250 | Not Available | Positive | 478925 - 479227 | 11024.6 |
| urease accessory protein urej | P608_02255 | Not Available | Positive | 479292 - 479909 | 20746.7 |
| urease subunit beta | P608_02260 | Not Available | Positive | 479964 - 480287 | 11569.7 |
| chemotactic transduction protein chpe | P608_02265 | Not Available | Positive | 480294 - 480965 | 23616.8 |
| urease subunit alpha | P608_02270 | Not Available | Positive | 480989 - 482731 | 61537.5 |
| gamma-glutamyl cyclotransferase | P608_02275 | Not Available | Negative | 482716 - 483222 | 18169.7 |
| urease accessory protein uree | P608_02280 | Not Available | Positive | 483332 - 483853 | 18893.5 |
| urease accessory protein uref | P608_02285 | Not Available | Positive | 483825 - 484553 | 26312.5 |
| hypothetical protein | P608_02290 | Not Available | Positive | 484567 - 484899 | 12590.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacteremia | Causes | PMC13579767 |
| Peritonitis | Causes | PMC13579767 |
| Wound infections | Causes | PMC13579767 |

