Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | ATCC 14940 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1266800 bp
Thymine Count
1252112 bp
Guanine Count
1158831 bp
Cytosine Count
1132932 bp
Genome Length
4810675 bp
Protein-coding Genes
4927 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| degt/dnrj/eryc1/strs aminotransferase family protein | CLOSYM_00347 | Not Available | Positive | 344472 - 345854 | 51376.9 |
| licd family protein | CLOSYM_00348 | Not Available | Positive | 345859 - 346722 | 33632.8 |
| glycosyltransferase, group 2 family protein | CLOSYM_00349 | Not Available | Positive | 346706 - 347716 | 38040.0 |
| serine-type d-ala-d-ala carboxypeptidase | CLOSYM_00350 | Not Available | Positive | 347706 - 349259 | 56818.7 |
| lysr substrate binding domain protein | CLOSYM_00351 | Not Available | Negative | 349325 - 350308 | 37072.2 |
| demethylmenaquinone methyltransferase | CLOSYM_00352 | Not Available | Positive | 350812 - 351513 | 25299.6 |
| putative glycerate dehydrogenase | CLOSYM_00353 | Not Available | Positive | 351632 - 352588 | 34891.7 |
| hypothetical protein | CLOSYM_00354 | Not Available | Positive | 352585 - 352704 | 4822.17 |
| putative glyoxylate reductase | CLOSYM_00355 | Not Available | Positive | 352728 - 353690 | 35349.6 |
| citrate transporter | CLOSYM_00356 | Not Available | Positive | 353958 - 355019 | 37365.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
