Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | ATCC 14940 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1266800 bp
Thymine Count
1252112 bp
Guanine Count
1158831 bp
Cytosine Count
1132932 bp
Genome Length
4810675 bp
Protein-coding Genes
4927 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase family protein | CLOSYM_01851 | Not Available | Negative | 1797691 - 1798110 | 16178.3 |
| transcriptional regulator, hxlr family | CLOSYM_01852 | Not Available | Negative | 1798235 - 1798591 | 13477.8 |
| histidinol phosphate phosphatase hisj family protein | CLOSYM_01853 | Not Available | Negative | 1798651 - 1799508 | 32414.1 |
| lysr substrate binding domain protein | CLOSYM_01854 | Not Available | Negative | 1799698 - 1800567 | 31702.6 |
| chromate transport protein | CLOSYM_01855 | Not Available | Positive | 1800844 - 1801509 | 24147.2 |
| chromate transport protein | CLOSYM_01856 | Not Available | Positive | 1801506 - 1802057 | 19483.6 |
| sigma-70 region 2 | CLOSYM_01857 | Not Available | Positive | 1802292 - 1803041 | 28160.1 |
| hypothetical protein | CLOSYM_01858 | Not Available | Positive | 1803034 - 1803765 | 27334.6 |
| undecaprenyl-diphosphatase uppp | CLOSYM_01859 | Not Available | Positive | 1803906 - 1804772 | 32107.4 |
| hypothetical protein | CLOSYM_01860 | Not Available | Negative | 1804907 - 1805602 | 26675.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
