Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | ATCC 14940 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1266800 bp
Thymine Count
1252112 bp
Guanine Count
1158831 bp
Cytosine Count
1132932 bp
Genome Length
4810675 bp
Protein-coding Genes
4927 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | CLOSYM_00077 | Not Available | Negative | 68496 - 69305 | 29782.5 |
| antar domain protein | CLOSYM_00078 | Not Available | Negative | 69321 - 69866 | 20208.6 |
| glutamate--ammonia ligase, catalytic domain protein | CLOSYM_00079 | Not Available | Negative | 69908 - 71215 | 48783.8 |
| diaminopimelate epimerase | CLOSYM_00080 | Not Available | Negative | 71350 - 72222 | 32413.0 |
| hypothetical protein | CLOSYM_00081 | Not Available | Positive | 72490 - 72636 | 5324.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | CLOSYM_00082 | Not Available | Positive | 72755 - 73354 | 22822.2 |
| abc-2 type transporter | CLOSYM_00083 | Not Available | Positive | 73425 - 74240 | 31602.1 |
| cell wall-binding repeat protein | CLOSYM_00084 | Not Available | Positive | 74379 - 75651 | 48079.1 |
| cell wall-binding repeat protein | CLOSYM_00085 | Not Available | Negative | 75829 - 77203 | 52470.6 |
| putative atp-dependent rna helicase dbpa | CLOSYM_00086 | Not Available | Positive | 77384 - 78838 | 54431.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
