Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | ATCC 14940 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1266800 bp
Thymine Count
1252112 bp
Guanine Count
1158831 bp
Cytosine Count
1132932 bp
Genome Length
4810675 bp
Protein-coding Genes
4927 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ump kinase | CLOSYM_01561 | Not Available | Positive | 1500805 - 1501506 | 25307.8 |
| ribosome recycling factor | CLOSYM_01562 | Not Available | Positive | 1501519 - 1502073 | 21045.5 |
| di-trans,poly-cis-decaprenylcistransferase | CLOSYM_01563 | Not Available | Positive | 1502176 - 1502919 | 28245.0 |
| phosphatidate cytidylyltransferase | CLOSYM_01564 | Not Available | Positive | 1503022 - 1503822 | 28793.9 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | CLOSYM_01565 | Not Available | Positive | 1503960 - 1505102 | 41872.8 |
| rip metalloprotease rsep | CLOSYM_01566 | Not Available | Positive | 1505104 - 1506285 | 43302.0 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | CLOSYM_01567 | Not Available | Positive | 1506424 - 1507491 | 37862.9 |
| dna polymerase iii, alpha subunit | CLOSYM_01568 | Not Available | Positive | 1507529 - 1512064 | 170289.0 |
| 4fe-4s binding domain protein | CLOSYM_01569 | Not Available | Negative | 1512315 - 1513421 | 40150.1 |
| o-acetylhomoserine aminocarboxypropyltransferase | CLOSYM_01570 | Not Available | Positive | 1513597 - 1514895 | 47615.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
