Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | ATCC 14940 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1266800 bp
Thymine Count
1252112 bp
Guanine Count
1158831 bp
Cytosine Count
1132932 bp
Genome Length
4810675 bp
Protein-coding Genes
4927 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpod | CLOSYM_01540 | Not Available | Positive | 1473803 - 1474921 | 43418.0 |
| hypothetical protein | CLOSYM_01541 | Not Available | Positive | 1475007 - 1475708 | 26734.3 |
| dinuclear metal center protein, ybgi family | CLOSYM_01542 | Not Available | Positive | 1475686 - 1476480 | 29219.2 |
| phosphoribulokinase/uridine kinase family protein | CLOSYM_01543 | Not Available | Positive | 1476519 - 1478174 | 63382.1 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | CLOSYM_01544 | Not Available | Negative | 1478241 - 1479044 | 28456.2 |
| caax amino terminal protease family protein | CLOSYM_01545 | Not Available | Positive | 1479152 - 1480210 | 40077.2 |
| aspartate carbamoyltransferase regulatory chain, allosteric domain protein | CLOSYM_01547 | Not Available | Negative | 1480888 - 1481313 | 16178.0 |
| aspartate carbamoyltransferase | CLOSYM_01548 | Not Available | Negative | 1481307 - 1482230 | 34592.8 |
| amidohydrolase family protein | CLOSYM_01549 | Not Available | Negative | 1482492 - 1483808 | 48368.4 |
| chloride transporter, clc family | CLOSYM_01550 | Not Available | Negative | 1483850 - 1485154 | 47030.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
