Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | ATCC 14940 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1266800 bp
Thymine Count
1252112 bp
Guanine Count
1158831 bp
Cytosine Count
1132932 bp
Genome Length
4810675 bp
Protein-coding Genes
4927 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transmembrane amino acid transporter protein | CLOSYM_01410 | Not Available | Positive | 1350862 - 1352103 | 44555.8 |
| hypothetical protein | CLOSYM_01411 | Not Available | Positive | 1352097 - 1352237 | 5292.45 |
| lysr substrate binding domain protein | CLOSYM_01412 | Not Available | Positive | 1352335 - 1353348 | 38112.1 |
| radical sam domain protein | CLOSYM_01413 | Not Available | Positive | 1353339 - 1354226 | 33610.6 |
| hypothetical protein | CLOSYM_01414 | Not Available | Positive | 1354253 - 1354666 | 15463.4 |
| polyphosphate:amp phosphotransferase | CLOSYM_01415 | Not Available | Positive | 1354695 - 1356206 | 59290.6 |
| flavoprotein family protein | CLOSYM_01416 | Not Available | Positive | 1356270 - 1357511 | 44720.0 |
| cytidylate kinase | CLOSYM_01417 | Not Available | Positive | 1357662 - 1358348 | 25095.1 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | CLOSYM_01418 | Not Available | Positive | 1358317 - 1359201 | 33017.6 |
| putative ribosomal protein s1 | CLOSYM_01419 | Not Available | Positive | 1359182 - 1360321 | 41335.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
