Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | ATCC 14940 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1266800 bp
Thymine Count
1252112 bp
Guanine Count
1158831 bp
Cytosine Count
1132932 bp
Genome Length
4810675 bp
Protein-coding Genes
4927 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase, gnat family | CLOSYM_01320 | Not Available | Positive | 1268887 - 1269663 | 28797.1 |
| rela/spot domain protein | CLOSYM_01321 | Not Available | Negative | 1269664 - 1270528 | 33279.6 |
| recombination protein u | CLOSYM_01322 | Not Available | Negative | 1270568 - 1271104 | 20720.6 |
| pseudouridine synthase, rlua family | CLOSYM_01323 | Not Available | Negative | 1271145 - 1272146 | 37714.0 |
| hypothetical protein | CLOSYM_01324 | Not Available | Negative | 1272179 - 1272748 | 21482.4 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | CLOSYM_01325 | Not Available | Negative | 1272784 - 1273593 | 29406.2 |
| putative radical sam protein ygiq | CLOSYM_01326 | Not Available | Negative | 1273600 - 1275555 | 74015.6 |
| had hydrolase, family ia, variant 3 | CLOSYM_01327 | Not Available | Negative | 1275570 - 1276256 | 25823.1 |
| putative 16s pseudouridylate synthase | CLOSYM_01328 | Not Available | Negative | 1276344 - 1277093 | 27345.5 |
| nol1/nop2/sun family protein | CLOSYM_01329 | Not Available | Negative | 1277078 - 1278445 | 51647.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
