Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Otoolea |
| Species | [Clostridium] symbiosum |
| Strain | ATCC 14940 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1266800 bp
Thymine Count
1252112 bp
Guanine Count
1158831 bp
Cytosine Count
1132932 bp
Genome Length
4810675 bp
Protein-coding Genes
4927 genes
Non-Coding Genes
116 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aspartate transaminase | CLOSYM_01290 | Not Available | Negative | 1243784 - 1244959 | 44024.4 |
| transcriptional regulator, asnc family | CLOSYM_01291 | Not Available | Negative | 1244956 - 1245438 | 18078.8 |
| hypothetical protein | CLOSYM_01292 | Not Available | Negative | 1245483 - 1246100 | 22583.3 |
| vanw-like protein | CLOSYM_01293 | Not Available | Negative | 1246103 - 1247665 | 54628.6 |
| exonuclease, dna polymerase iii, epsilon subunit family | CLOSYM_01294 | Not Available | Negative | 1247839 - 1248630 | 29954.2 |
| endonuclease iii | CLOSYM_01295 | Not Available | Negative | 1248672 - 1249328 | 25074.4 |
| radical sam domain protein | CLOSYM_01296 | Not Available | Negative | 1249354 - 1251186 | 71132.5 |
| cytidine and deoxycytidylate deaminase zinc-binding region | CLOSYM_01297 | Not Available | Negative | 1251188 - 1251721 | 19924.6 |
| sua5/ycio/yrdc/ywlc family protein | CLOSYM_01298 | Not Available | Negative | 1251735 - 1252799 | 38346.4 |
| dna-binding helix-turn-helix protein | CLOSYM_01299 | Not Available | Positive | 1252944 - 1253223 | 10774.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
