Snodgrassella alvi SCGC AB-598-J21 SCG598J21_12956

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Snodgrassella

Description

Snodgrassella alvi SCGC AB-598-J21, designated as SCG598J21_12956, is a bacterium primarily found in the hindgut of various bee species, including Apis mellifera (honey bees), Anthophila (a group encompassing most bees), and Bombus terrestris (the buff-tailed bumblebee). This organism is notable for its single replicon structure, indicating a simplified genomic organization that may facilitate efficient replication and adaptation within its specific habitat. The primary habitats of S. alvi include the gut, specifically the ileum and rectum regions, which are critical areas for nutrient absorption and waste excretion in bees. The association of this bacterium with the gut microbiome of bees highlights its potential role in the digestive processes and overall health of its hosts. The reference accession for S. alvi SCGC AB-598-J21 is AVQL00000000.1, which provides a basis for further genomic studies and comparisons with other gut-associated bacteria. The ecological importance of Snodgrassella alvi lies in its contribution to the gut microbiome of bees, which is essential for their digestion and nutrient acquisition. The symbiotic relationship between S. alvi and its bee hosts may influence the health and resilience of bee populations, particularly in the context of environmental stressors and habitat changes. Understanding the role of this bacterium in bee health can provide insights into the broader implications for pollinator conservation and ecosystem stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusSnodgrassella
SpeciesSnodgrassella alvi
StrainSCGC AB-598-J21 SCG598J21_12956

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Snodgrassella alvi SCGC AB-598-J21 SCG598J21_12956
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatbee hindgut; gut; ileum; rectum
Biotic relationshipNot Available
Host(s)Apis mellifera, Anthophila, Bombus terrestris
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Snodgrassella alvi SCGC AB-598-J21 SCG598J21_12956


Gene Summary

Adenine Count

689326 bp

Thymine Count

690862 bp

Guanine Count

480448 bp

Cytosine Count

473522 bp

Genome Length

2334158 bp

Protein-coding Genes

2382 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyltransferase involved in lps biosynthesisSASC598J21_021610Not AvailablePositive2056066 - 205686930856.1
glycosyltransferase involved in cell wall biogenesisSASC598J21_021620Not AvailablePositive2056874 - 205789639386.6
hypothetical proteinSASC598J21_021630Not AvailableNegative2057908 - 205848022560.9
hypothetical proteinSASC598J21_021640Not AvailableNegative2058491 - 205920428292.0
na+/serine symporterSASC598J21_021650Not AvailablePositive2059581 - 206081644237.4
coenzyme f420-dependent n5,n10-methylene tetrahydromethanopterin reductaseSASC598J21_021660Not AvailablePositive2060947 - 206194236748.4
lipopolysaccharide biosynthesis protein, lps:glycosyltransferaseSASC598J21_021670Not AvailablePositive2062134 - 206303034219.5
primosomal protein n' (replication factor y) - superfamily ii helicaseSASC598J21_021680Not AvailableNegative2063145 - 206534983317.6
aspartate carbamoyltransferase, catalytic chainSASC598J21_021690Not AvailablePositive2065579 - 206652034680.5
aspartate carbamoyltransferase, regulatory subunitSASC598J21_021700Not AvailablePositive2066524 - 206698516873.2

Displaying genes 2201 – 2210 of 2464 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.