Snodgrassella alvi SCGC AB-598-J21 SCG598J21_12956

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Snodgrassella

Description

Snodgrassella alvi SCGC AB-598-J21, designated as SCG598J21_12956, is a bacterium primarily found in the hindgut of various bee species, including Apis mellifera (honey bees), Anthophila (a group encompassing most bees), and Bombus terrestris (the buff-tailed bumblebee). This organism is notable for its single replicon structure, indicating a simplified genomic organization that may facilitate efficient replication and adaptation within its specific habitat. The primary habitats of S. alvi include the gut, specifically the ileum and rectum regions, which are critical areas for nutrient absorption and waste excretion in bees. The association of this bacterium with the gut microbiome of bees highlights its potential role in the digestive processes and overall health of its hosts. The reference accession for S. alvi SCGC AB-598-J21 is AVQL00000000.1, which provides a basis for further genomic studies and comparisons with other gut-associated bacteria. The ecological importance of Snodgrassella alvi lies in its contribution to the gut microbiome of bees, which is essential for their digestion and nutrient acquisition. The symbiotic relationship between S. alvi and its bee hosts may influence the health and resilience of bee populations, particularly in the context of environmental stressors and habitat changes. Understanding the role of this bacterium in bee health can provide insights into the broader implications for pollinator conservation and ecosystem stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusSnodgrassella
SpeciesSnodgrassella alvi
StrainSCGC AB-598-J21 SCG598J21_12956

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Snodgrassella alvi SCGC AB-598-J21 SCG598J21_12956
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatbee hindgut; gut; ileum; rectum
Biotic relationshipNot Available
Host(s)Apis mellifera, Anthophila, Bombus terrestris
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Snodgrassella alvi SCGC AB-598-J21 SCG598J21_12956


Gene Summary

Adenine Count

689326 bp

Thymine Count

690862 bp

Guanine Count

480448 bp

Cytosine Count

473522 bp

Genome Length

2334158 bp

Protein-coding Genes

2382 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent exodnase (exonuclease v), alpha subunit - helicase superfamily i memberSASC598J21_018500Not AvailableNegative1699139 - 170092065313.5
abc-type antimicrobial peptide transport system, atpase componentSASC598J21_018510Not AvailableNegative1700957 - 170165225564.9
abc-type transport system, involved in lipoprotein release, permease componentSASC598J21_018520Not AvailableNegative1701645 - 170289545525.0
nadh:flavin oxidoreductase, old yellow enzyme familySASC598J21_018530Not AvailablePositive1703441 - 170614397600.0
membrane-associated lipoprotein involved in thiamine biosynthesisSASC598J21_018540Not AvailablePositive1706168 - 170713635942.3
histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylaseSASC598J21_018550Not AvailableNegative1707212 - 170827039497.3
sulfate permease and related transporter (mfs superfamily)SASC598J21_018560Not AvailableNegative1708352 - 170988757249.5
phosphoribosylaminoimidazole carboxylase (ncair synthetase)SASC598J21_018570Not AvailableNegative1709918 - 171110543206.0
ricin-type beta-trefoil lectin domainSASC598J21_018580Not AvailableNegative1711586 - 171217621685.7
putative sam-dependent methyltransferaseSASC598J21_018590Not AvailableNegative1712205 - 171315237073.1

Displaying genes 1881 – 1890 of 2464 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.