Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | strain EGD-AQ6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1217922 bp
Thymine Count
1185658 bp
Guanine Count
1816033 bp
Cytosine Count
1866642 bp
Genome Length
6086255 bp
Protein-coding Genes
5441 genes
Non-Coding Genes
217 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | O204_16190 | Not Available | Positive | 653794 - 654267 | 17216.5 |
| permease | O204_16195 | Not Available | Negative | 654319 - 655389 | 39524.2 |
| response regulator sira | O204_16200 | Not Available | Negative | 655420 - 655659 | 8599.39 |
| peptidase m48 | O204_16205 | Not Available | Positive | 655754 - 657187 | 53041.2 |
| serine peptidase | O204_16210 | Not Available | Negative | 657253 - 658692 | 50690.2 |
| sigma factor algu regulatory protein mucb | O204_16215 | Not Available | Negative | 658927 - 659889 | 35468.2 |
| sigma factor algu negative regulatory protein | O204_16220 | Not Available | Negative | 659905 - 660492 | 20895.7 |
| rna polymerase sigma factor algu | O204_16225 | Not Available | Negative | 660525 - 661106 | 22252.3 |
| l-aspartate oxidase | O204_16230 | Not Available | Positive | 661569 - 663185 | 59645.9 |
| hypothetical protein | O204_16235 | Not Available | Negative | 663154 - 663600 | 17108.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.






