Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | strain EGD-AQ6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1217922 bp
Thymine Count
1185658 bp
Guanine Count
1816033 bp
Cytosine Count
1866642 bp
Genome Length
6086255 bp
Protein-coding Genes
5441 genes
Non-Coding Genes
217 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-1 | O204_08395 | Not Available | Positive | 4612866 - 4613084 | 8303.06 |
| atp-dependent clp protease atp-binding protein | O204_08400 | Not Available | Negative | 4613338 - 4615608 | 83307.7 |
| atp-dependent clp protease clps | O204_08405 | Not Available | Negative | 4615638 - 4616006 | 13741.3 |
| cold-shock protein | O204_08410 | Not Available | Positive | 4616225 - 4616509 | 10031.0 |
| isocitrate dehydrogenase | O204_08415 | Not Available | Negative | 4616591 - 4617859 | 45901.3 |
| isocitrate dehydrogenase | O204_08420 | Not Available | Positive | 4618341 - 4620566 | 80333.1 |
| nudix hydrolase | O204_08425 | Not Available | Positive | 4620793 - 4621239 | 16890.1 |
| thiouridylase | O204_08430 | Not Available | Positive | 4621299 - 4622423 | 41548.4 |
| dna repair protein hhh-gpd | O204_08435 | Not Available | Positive | 4622420 - 4623043 | 23205.4 |
| adenylosuccinate lyase | O204_08440 | Not Available | Positive | 4623169 - 4624539 | 50732.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.






