Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | strain EGD-AQ6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1217922 bp
Thymine Count
1185658 bp
Guanine Count
1816033 bp
Cytosine Count
1866642 bp
Genome Length
6086255 bp
Protein-coding Genes
5441 genes
Non-Coding Genes
217 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | O204_25990 | Not Available | Positive | 3154963 - 3156366 | 50782.2 |
| tryptophan 2,3-dioxygenase | O204_25995 | Not Available | Negative | 3156524 - 3157381 | 32920.3 |
| kynurenine formamidase | O204_26000 | Not Available | Negative | 3157378 - 3158028 | 23702.3 |
| cupin | O204_26005 | Not Available | Positive | 3158414 - 3158758 | 13124.8 |
| 3-hydroxyisobutyrate dehydrogenase | O204_26010 | Not Available | Negative | 3158807 - 3159694 | 30344.7 |
| methylmalonate-semialdehyde dehydrogenase | O204_26015 | Not Available | Negative | 3159710 - 3161227 | 53788.0 |
| lysr family transcriptional regulator | O204_26020 | Not Available | Positive | 3161359 - 3162306 | 35366.7 |
| hypothetical protein | O204_26025 | Not Available | Positive | 3162637 - 3162927 | 10522.7 |
| lysr family transcriptional regulator | O204_26030 | Not Available | Negative | 3162973 - 3163920 | 34335.3 |
| hypothetical protein | O204_26035 | Not Available | Negative | 3163920 - 3164768 | 30649.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.






