Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | strain EGD-AQ6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1217922 bp
Thymine Count
1185658 bp
Guanine Count
1816033 bp
Cytosine Count
1866642 bp
Genome Length
6086255 bp
Protein-coding Genes
5441 genes
Non-Coding Genes
217 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly(beta-d-mannuronate) c5 epimerase | O204_02550 | Not Available | Positive | 2422177 - 2423766 | 58271.9 |
| alginate o-acetyltransferase | O204_02555 | Not Available | Positive | 2423778 - 2425226 | 53484.2 |
| poly(beta-d-mannuronate) lyase | O204_02560 | Not Available | Positive | 2425235 - 2426344 | 41813.6 |
| poly(beta-d-mannuronate) o-acetylase | O204_02565 | Not Available | Positive | 2426563 - 2428095 | 57893.7 |
| alginate o-acetyltransferase | O204_02570 | Not Available | Positive | 2428107 - 2429291 | 43927.2 |
| alginate o-acetyltransferase | O204_02575 | Not Available | Positive | 2429308 - 2429964 | 22813.2 |
| mannose-1-phosphate guanylyltransferase | O204_02580 | Not Available | Positive | 2430138 - 2431589 | 53867.5 |
| hypothetical protein | O204_02585 | Not Available | Negative | 2431680 - 2432009 | 11030.9 |
| multidrug transporter | O204_02590 | Not Available | Positive | 2432339 - 2432803 | 17088.6 |
| short-chain dehydrogenase | O204_02595 | Not Available | Positive | 2432818 - 2433630 | 28319.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.






