Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | strain EGD-AQ6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1217922 bp
Thymine Count
1185658 bp
Guanine Count
1816033 bp
Cytosine Count
1866642 bp
Genome Length
6086255 bp
Protein-coding Genes
5441 genes
Non-Coding Genes
217 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | O204_23055 | Not Available | Negative | 2092813 - 2093793 | 35413.7 |
| ribose 5-phosphate isomerase | O204_23060 | Not Available | Negative | 2093857 - 2094318 | 16217.4 |
| d-ribose transporter atp binding protein | O204_23065 | Not Available | Positive | 2094602 - 2096089 | 53394.6 |
| sugar abc transporter permease | O204_23070 | Not Available | Positive | 2096086 - 2097063 | 34110.8 |
| sugar abc transporter substrate-binding protein | O204_23075 | Not Available | Positive | 2097098 - 2098105 | 35788.7 |
| short-chain dehydrogenase | O204_23080 | Not Available | Positive | 2098194 - 2098949 | 26136.7 |
| iditol 2-dehydrogenase | O204_23085 | Not Available | Positive | 2098977 - 2100092 | 41110.9 |
| dihydroxyacetone kinase subunit k | O204_23090 | Not Available | Positive | 2100149 - 2101150 | 35423.0 |
| dihydroxyacetone kinase | O204_23095 | Not Available | Positive | 2101154 - 2101801 | 22383.6 |
| lysr family transcriptional regulator | O204_23100 | Not Available | Negative | 2101758 - 2102654 | 32112.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.






