Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas simiae |
| Strain | strain EGD-AQ6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere; rhizosphere of wheat |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Arabidopsis, Brachypodium distachyon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1217922 bp
Thymine Count
1185658 bp
Guanine Count
1816033 bp
Cytosine Count
1866642 bp
Genome Length
6086255 bp
Protein-coding Genes
5441 genes
Non-Coding Genes
217 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dopa 4,5-dioxygenase | O204_20035 | Not Available | Negative | 1415128 - 1415499 | 14104.9 |
| lysr family transcriptional regulator | O204_20040 | Not Available | Negative | 1415489 - 1416439 | 35651.6 |
| choline-sulfatase | O204_20045 | Not Available | Positive | 1416543 - 1418057 | 57082.6 |
| glycine/betaine abc transporter substrate-binding protein | O204_20050 | Not Available | Positive | 1418073 - 1418987 | 33066.8 |
| sulp family inorganic anion transporter | O204_20055 | Not Available | Positive | 1419121 - 1420713 | 57231.8 |
| shikimate 5-dehydrogenase | O204_20060 | Not Available | Negative | 1420750 - 1421568 | 29210.9 |
| coproporphyrinogen iii oxidase | O204_20065 | Not Available | Negative | 1421568 - 1422500 | 35252.1 |
| quinone oxidoreductase | O204_20070 | Not Available | Positive | 1422660 - 1423637 | 34167.9 |
| trna threonylcarbamoyladenosine biosynthesis protein rimn | O204_20075 | Not Available | Negative | 1423768 - 1424325 | 20728.9 |
| dna processing protein dpra | O204_20080 | Not Available | Negative | 1424380 - 1425474 | 38680.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.






