Thioclava indica strain DT23-4

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Thioclava

Description

Thioclava indica strain DT23-4 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain features a single replicon, which is indicative of its genetic structure and replication mechanism. The accession number for this strain is AUNB00000000.1, which allows for its identification and reference in genomic databases. As a member of the genus Thioclava, this strain is likely involved in sulfur oxidation processes, which are significant in various ecological contexts, particularly in sulfur-rich environments. The rod shape of Thioclava indica strain DT23-4 suggests adaptations for motility and nutrient acquisition within its ecological niche. The presence of a single replicon may imply a streamlined genetic organization, which can be advantageous for survival in specific habitats. Understanding the traits of Thioclava indica strain DT23-4 enhances our knowledge of microbial diversity and the ecological roles such bacteria play in biogeochemical cycles, particularly in environments where sulfur compounds are prevalent.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusThioclava
SpeciesThioclava indica
Strainstrain DT23-4

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioclava indica strain DT23-4 contig99, whole genome shotgun

Gene Summary

Adenine Count

759413 bp

Thymine Count

758846 bp

Guanine Count

1150326 bp

Cytosine Count

1153483 bp

Genome Length

3822068 bp

Protein-coding Genes

3658 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phenylalanyl-trna synthetase subunit betaDT23_05055Not AvailableNegative2598100 - 260052085780.7
hypothetical proteinDT23_05060Not AvailableNegative2600536 - 260082311125.6
hypothetical proteinDT23_05065Not AvailableNegative2600937 - 260138917513.3
phenylalanyl-trna synthetase subunit alphaDT23_05070Not AvailableNegative2601389 - 260246239987.0
50s ribosomal protein l20DT23_05075Not AvailableNegative2602763 - 260314013749.6
50s ribosomal protein l35DT23_05080Not AvailableNegative2603157 - 26033577519.55
hypothetical proteinDT23_05085Not AvailableNegative2603504 - 26037438342.33
pyruvate kinaseDT23_05090Not AvailableNegative2603779 - 260522452077.3
hypothetical proteinDT23_05095Not AvailablePositive2605363 - 260610927286.5
hypothetical proteinDT23_05100Not AvailablePositive2606251 - 260709929194.2

Displaying genes 2521 – 2530 of 3719 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.