Thioclava indica strain DT23-4

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Thioclava

Description

Thioclava indica strain DT23-4 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain features a single replicon, which is indicative of its genetic structure and replication mechanism. The accession number for this strain is AUNB00000000.1, which allows for its identification and reference in genomic databases. As a member of the genus Thioclava, this strain is likely involved in sulfur oxidation processes, which are significant in various ecological contexts, particularly in sulfur-rich environments. The rod shape of Thioclava indica strain DT23-4 suggests adaptations for motility and nutrient acquisition within its ecological niche. The presence of a single replicon may imply a streamlined genetic organization, which can be advantageous for survival in specific habitats. Understanding the traits of Thioclava indica strain DT23-4 enhances our knowledge of microbial diversity and the ecological roles such bacteria play in biogeochemical cycles, particularly in environments where sulfur compounds are prevalent.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusThioclava
SpeciesThioclava indica
Strainstrain DT23-4

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioclava indica strain DT23-4 contig99, whole genome shotgun

Gene Summary

Adenine Count

759413 bp

Thymine Count

758846 bp

Guanine Count

1150326 bp

Cytosine Count

1153483 bp

Genome Length

3822068 bp

Protein-coding Genes

3658 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDT23_04220Not AvailablePositive2124294 - 212552943346.4
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseDT23_04225Not AvailablePositive2125615 - 212673639821.8
hypothetical proteinDT23_04230Not AvailableNegative2126821 - 212758527671.8
1-aminocyclopropane-1-carboxylate deaminaseDT23_04235Not AvailablePositive2127745 - 212888440823.9
cell wall hydrolaseDT23_04240Not AvailablePositive2128960 - 213018644086.9
penicillin-binding protein 1aDT23_04245Not AvailablePositive2130352 - 213291394046.0
hypothetical proteinDT23_04250Not AvailablePositive2133070 - 213419742011.9
hypothetical proteinDT23_04255Not AvailablePositive2134202 - 213475019939.8
hypothetical proteinDT23_04260Not AvailablePositive2134802 - 213553326582.2
hypothetical proteinDT23_04265Not AvailablePositive2135637 - 213641028163.5

Displaying genes 2101 – 2110 of 3719 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.