Sphingobium indicum IP26

Gram-negativeRodNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium indicum IP26 is a Gram-negative, aerobic bacterium characterized by its rod shape and lack of mobility. This organism has a unique structure with two membranes and possesses flagella, which may play a role in its ecological interactions despite its non-motility. Sphingobium indicum is a mesophilic bacterium, with an optimal growth temperature of 28°C, indicating its preference for moderate temperature conditions. This species is free-living and inhabits terrestrial environments, showcasing its ability to thrive independently within soil ecosystems. The organism has a single replicon, which is characteristic of its genomic structure, and is cataloged under accession AUDA00000000.1 in genomic databases. The ecological insight provided by Sphingobium indicum IP26 lies in its adaptability to terrestrial habitats and its potential role in nutrient cycling within these ecosystems. As a free-living bacterium, it may contribute to the degradation of organic materials, thereby impacting soil health and fertility. Its aerobic nature suggests that it plays a role in aerobic processes, potentially influencing the dynamics of microbial communities in its environment. Overall, Sphingobium indicum IP26 exemplifies the diversity of microbial life and its significance in terrestrial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium indicum
StrainIP26

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Sphingobium indicum IP26
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature28
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium indicum IP26 Contig99, whole genome shotgun sequence.

Gene Summary

Adenine Count

1048080 bp

Thymine Count

1050991 bp

Guanine Count

1878432 bp

Cytosine Count

1870282 bp

Genome Length

5847843 bp

Protein-coding Genes

5626 genes

Non-Coding Genes

156 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane protein insertion efficiency factorM527_18380Not AvailablePositive1636459 - 16366717721.54
membrane protein insertase yidcM527_18385Not AvailablePositive1636697 - 163840062701.4
gtp-binding protein ysxcM527_18390Not AvailablePositive1638411 - 163905823759.7
phna proteinM527_18395Not AvailablePositive1639062 - 163936410812.8
2'-5' rna ligaseM527_18400Not AvailableNegative1639370 - 163995121413.9
carbon starvation protein aM527_18405Not AvailablePositive1640154 - 164216670234.6
hypothetical proteinM527_18410Not AvailablePositive1642202 - 16423485725.93
xdhc/coxi family proteinM527_18415Not AvailableNegative1642426 - 164334332109.2
peptidase s24M527_18420Not AvailableNegative1643600 - 164424423832.7
hypothetical proteinM527_18425Not AvailablePositive1644384 - 16445697460.04

Displaying genes 1751 – 1760 of 5782 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.