Cyclobacterium qasimii M12-11B

sphereaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Cyclobacterium

Description

Cyclobacterium qasimii M12-11B is a Gram-negative, spherical bacterium that exhibits aerobic respiration and is characterized by its psychrotolerant nature, with an optimal growth temperature of 16°C. This species is non-motile, indicating a lack of flagella or other structures typically associated with movement in bacteria. The organism possesses a single replicon, which is a notable trait in bacterial genetics, suggesting a streamlined genomic architecture that may contribute to its adaptability in cold environments. The accession number for Cyclobacterium qasimii M12-11B is ATNM00000000.1, which provides a reference point for researchers seeking to explore its genetic and phenotypic characteristics further. The psychrotolerant trait of Cyclobacterium qasimii M12-11B indicates its ability to thrive in low-temperature habitats, which can include polar regions, deep-sea environments, and other cold ecosystems. This adaptability suggests that it may play a significant role in biogeochemical cycles within its ecological niche, particularly in the breakdown of organic matter and the cycling of nutrients in cold waters. Understanding the specific ecological functions of Cyclobacterium qasimii M12-11B can provide insights into microbial life in extreme environments and the overall health of these fragile ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusCyclobacterium
SpeciesCyclobacterium qasimii
StrainM12-11B

Profile

Physiology
Gram staining propertiesGram-negative
Shapesphere
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cyclobacterium qasimii M12-11B contig00035, whole genome shotgun

Gene Summary

Adenine Count

1930163 bp

Thymine Count

1923399 bp

Guanine Count

1183581 bp

Cytosine Count

1254781 bp

Genome Length

6291928 bp

Protein-coding Genes

5958 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ssu ribosomal protein s1pADICYQ_5777Not AvailableNegative6074365 - 607614665931.8
hnh endonuclease family proteinADICYQ_5778Not AvailableNegative6076330 - 607684819780.8
dipeptidyl peptidase viADICYQ_5779Not AvailableNegative6076848 - 607754625747.8
tmrna-binding protein smpbADICYQ_5780Not AvailableNegative6077626 - 607809018033.3
tsad/kae1/qri7 protein, required for threonylcarbamoyladenosine t(6)a37 formation in trnaADICYQ_5781Not AvailableNegative6078083 - 607904534738.5
hypothetical proteinADICYQ_5782Not AvailablePositive6079242 - 6083708168444.0
deoxyribodipyrimidine photolyaseADICYQ_5783Not AvailablePositive6083749 - 608497848330.7
hypothetical proteinADICYQ_5784Not AvailableNegative6085069 - 608573725581.0
l-seryl-trna(sec) selenium transferase-related proteinADICYQ_5785Not AvailablePositive6086087 - 608713638098.3
serine phosphatase rsbu, regulator of sigma subunitADICYQ_5786Not AvailablePositive6087613 - 608960476586.8

Displaying genes 5781 – 5790 of 6001 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.