Sphingobium baderi LL03

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium baderi LL03 is a notable microbial species characterized by the presence of flagella, which suggests that it possesses motility capabilities. This trait can be significant for its ecological interactions, as motility may enhance its ability to colonize various environments and respond to changes in nutrient availability. The organism has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and cellular processes. This feature can be advantageous for its adaptability and survival in diverse ecosystems, as it can allocate resources effectively towards growth and reproduction. The genomic data for Sphingobium baderi LL03 is cataloged under the accession number ATIB00000000.1, which provides a reference point for further research and comparative studies with other members of the Sphingobium genus and related taxa. In summary, Sphingobium baderi LL03 exhibits motility through its flagella and possesses a single replicon, traits that may contribute to its ecological adaptability and survival. Such features could allow this bacterium to thrive in varied environments, potentially influencing nutrient cycling and interactions within microbial communities. Understanding these characteristics may provide insights into the ecological roles of Sphingobium baderi LL03 in its natural habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium wenxiniae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium baderi LL03 contig092, whole genome shotgun sequence.

Gene Summary

Adenine Count

883809 bp

Thymine Count

883349 bp

Guanine Count

1538609 bp

Cytosine Count

1542507 bp

Genome Length

4848286 bp

Protein-coding Genes

4742 genes

Non-Coding Genes

139 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinL485_21065Not AvailableNegative4101738 - 41019808796.67
formate dehydrogenase subunit alphaL485_21070Not AvailableNegative4101990 - 4104836103474.0
formate dehydrogenase subunit betaL485_21075Not AvailableNegative4104842 - 410641954848.8
hypothetical proteinL485_21080Not AvailableNegative4106416 - 410688616622.2
maoc family dehydrataseL485_21085Not AvailableNegative4107085 - 410753716541.9
3-methylcrotonyl-coa carboxylase subunit alphaL485_21090Not AvailableNegative4107537 - 410938165088.4
acetyl-coa carboxylase subunit betaL485_21095Not AvailableNegative4109381 - 411098257086.4
isovaleryl-coa dehydrogenaseL485_21100Not AvailableNegative4110979 - 411212441032.4
hypothetical proteinL485_21105Not AvailablePositive4112233 - 411310231987.9
hypothetical proteinL485_21110Not AvailablePositive4113312 - 41134615315.35

Displaying genes 4151 – 4160 of 4881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.