Sphingobium baderi LL03

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium baderi LL03 is a notable microbial species characterized by the presence of flagella, which suggests that it possesses motility capabilities. This trait can be significant for its ecological interactions, as motility may enhance its ability to colonize various environments and respond to changes in nutrient availability. The organism has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and cellular processes. This feature can be advantageous for its adaptability and survival in diverse ecosystems, as it can allocate resources effectively towards growth and reproduction. The genomic data for Sphingobium baderi LL03 is cataloged under the accession number ATIB00000000.1, which provides a reference point for further research and comparative studies with other members of the Sphingobium genus and related taxa. In summary, Sphingobium baderi LL03 exhibits motility through its flagella and possesses a single replicon, traits that may contribute to its ecological adaptability and survival. Such features could allow this bacterium to thrive in varied environments, potentially influencing nutrient cycling and interactions within microbial communities. Understanding these characteristics may provide insights into the ecological roles of Sphingobium baderi LL03 in its natural habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium wenxiniae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium baderi LL03 contig092, whole genome shotgun sequence.

Gene Summary

Adenine Count

883809 bp

Thymine Count

883349 bp

Guanine Count

1538609 bp

Cytosine Count

1542507 bp

Genome Length

4848286 bp

Protein-coding Genes

4742 genes

Non-Coding Genes

139 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna pseudouridine synthaseL485_19305Not AvailableNegative3733566 - 373424023977.1
hypothetical proteinL485_19310Not AvailablePositive3734329 - 373526434999.1
nad(p)h quinone oxidoreductaseL485_19315Not AvailableNegative3735314 - 373591320684.6
pirinL485_19320Not AvailableNegative3736010 - 373681629329.6
lysr family transcriptional regulatorL485_19325Not AvailablePositive3736837 - 373773032211.8
chemotaxis protein cheyL485_19330Not AvailablePositive3737941 - 373864826377.1
hypothetical proteinL485_19335Not AvailableNegative3738758 - 373954328541.9
deoxycytidine triphosphate deaminaseL485_19340Not AvailableNegative3739565 - 374011920495.4
hypothetical proteinL485_19345Not AvailableNegative3740126 - 374056915013.0
hypothetical proteinL485_19350Not AvailableNegative3740566 - 374120423270.5

Displaying genes 3801 – 3810 of 4881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.