Sphingobium baderi LL03

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium baderi LL03 is a notable microbial species characterized by the presence of flagella, which suggests that it possesses motility capabilities. This trait can be significant for its ecological interactions, as motility may enhance its ability to colonize various environments and respond to changes in nutrient availability. The organism has a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and cellular processes. This feature can be advantageous for its adaptability and survival in diverse ecosystems, as it can allocate resources effectively towards growth and reproduction. The genomic data for Sphingobium baderi LL03 is cataloged under the accession number ATIB00000000.1, which provides a reference point for further research and comparative studies with other members of the Sphingobium genus and related taxa. In summary, Sphingobium baderi LL03 exhibits motility through its flagella and possesses a single replicon, traits that may contribute to its ecological adaptability and survival. Such features could allow this bacterium to thrive in varied environments, potentially influencing nutrient cycling and interactions within microbial communities. Understanding these characteristics may provide insights into the ecological roles of Sphingobium baderi LL03 in its natural habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium wenxiniae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium baderi LL03 contig092, whole genome shotgun sequence.

Gene Summary

Adenine Count

883809 bp

Thymine Count

883349 bp

Guanine Count

1538609 bp

Cytosine Count

1542507 bp

Genome Length

4848286 bp

Protein-coding Genes

4742 genes

Non-Coding Genes

139 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transglycosylaseL485_07765Not AvailableNegative1458979 - 14592338782.33
hypothetical proteinL485_07770Not AvailableNegative1459423 - 145972211346.7
hypothetical proteinL485_07775Not AvailableNegative1459785 - 146012611569.8
thiouridylaseL485_07780Not AvailablePositive1460232 - 146133839411.1
atp phosphoribosyltransferaseL485_07785Not AvailablePositive1461380 - 146204223786.7
histidinol dehydrogenaseL485_07790Not AvailablePositive1462032 - 146332144964.4
transcription antitermination protein nusbL485_07795Not AvailablePositive1463355 - 146380116596.7
hypothetical proteinL485_07800Not AvailableNegative1464807 - 14649987221.71
pyrophosphataseL485_07805Not AvailablePositive1465001 - 146712472542.0
8-amino-7-oxononanoate synthaseL485_07810Not AvailablePositive1467242 - 146836639187.3

Displaying genes 1581 – 1590 of 4881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.