Actinomyces sp. HPA0247

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Actinomyces

Description

Actinomyces sp. HPA0247 is characterized by having a single replicon, which is a notable trait among bacteria, potentially influencing its genetic stability and replication process. This organism is cataloged under the accession number ATCA00000000.1, which provides a unique identifier for its genomic data. As a member of the Actinomyces genus, this species is likely to be involved in various ecological interactions, particularly in the human microbiome, where members of this genus are commonly found. Actinomyces species are known for their role in the degradation of organic materials and may contribute to the complex microbial communities present in different environments, including soil and the oral cavity. The presence of a single replicon can suggest a streamlined genomic structure, which may facilitate specific adaptations to its ecological niche. Understanding the genomic characteristics of Actinomyces sp. HPA0247 could provide insights into its metabolic capabilities and ecological roles. Further research could elucidate its functions within microbial communities and its interactions with host organisms, contributing to our knowledge of microbial ecology and the dynamics of the microbiome.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusActinomyces
SpeciesActinomyces sp. HPA0247
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Actinomyces sp. HPA0247
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinomyces sp. HPA0247 acAqT-supercont1.3.C14, whole genome

Gene Summary

Adenine Count

431089 bp

Thymine Count

416940 bp

Guanine Count

782208 bp

Cytosine Count

798147 bp

Genome Length

2428384 bp

Protein-coding Genes

2007 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein-export membrane protein secdHMPREF1478_01851Not AvailableNegative2176634 - 217858668551.8
preprotein translocase, yajc subunitHMPREF1478_01852Not AvailableNegative2178613 - 217907117603.7
holliday junction atp-dependent dna helicase ruvbHMPREF1478_01853Not AvailableNegative2179206 - 218025837416.0
holliday junction dna helicase ruvaHMPREF1478_01854Not AvailableNegative2180251 - 218085620549.9
crossover junction endodeoxyribonuclease ruvcHMPREF1478_01855Not AvailableNegative2180910 - 218153921958.5
pyridoxal 5'-phosphate synthase, glutaminase subunit pdx2HMPREF1478_01856Not AvailableNegative2181539 - 218213221018.3
pyridoxal biosynthesis lyase pdxsHMPREF1478_01857Not AvailableNegative2182126 - 218302831951.4
yebc/pmpr family dna-binding regulatory proteinHMPREF1478_01858Not AvailableNegative2183031 - 218379227012.5
hypothetical proteinHMPREF1478_01859Not AvailableNegative2183939 - 218442117328.3
hypothetical proteinHMPREF1478_01860Not AvailablePositive2184454 - 21846878861.34

Displaying genes 1851 – 1860 of 2065 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.