Porphyromonas gingivalis SJD12

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Porphyromonas

Description

Porphyromonas gingivalis SJD12 is a Gram-negative, non-motile, rod-shaped bacterium that thrives in an anaerobic environment, making it well-suited for its host-associated habitat. This organism is classified as mesophilic, with an optimal growth temperature of 37°C, which is typical for many pathogens associated with warm-blooded hosts. The bacterium possesses two membranes, a characteristic feature of Gram-negative bacteria, and it has a single replicon, indicating a streamlined genome organization. Importantly, Porphyromonas gingivalis SJD12 does not undergo sporulation, which is consistent with many anaerobes that inhabit stable environments within host organisms. In terms of its ecological role, Porphyromonas gingivalis is recognized for its association with periodontal diseases in humans, highlighting its significance in oral microbiology. As a free-living organism, it may contribute to the microbial community dynamics in the oral cavity, influencing health and disease states. The presence of flagella, despite its non-motility, suggests that it may have other functions, potentially related to its interactions within the host environment. The accession number ASYP00000000.1 provides a reference for genetic information related to this strain, facilitating further research into its biology and pathogenic potential. Understanding the traits of Porphyromonas gingivalis SJD12 can provide insights into its role in human health, particularly in relation to oral diseases and the intricate balance of the oral microbiome.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPorphyromonadaceae
GenusPorphyromonas
SpeciesPorphyromonas gingivalis
StrainSJD12

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Porphyromonas gingivalis SJD12
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonas gingivalis SJD12 contig99, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1964 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii restriction endonuclease subunit rSJDPG12_05765Not AvailableNegative1108527 - 1111268104270.0
dna methylaseSJDPG12_05770Not AvailableNegative1111261 - 111292862737.3
hypothetical proteinSJDPG12_05775Not AvailableNegative1113025 - 111347717131.7
transcriptional regulatorSJDPG12_05780Not AvailableNegative1113467 - 111512262905.7
helicase snf2SJDPG12_05785Not AvailableNegative1115137 - 1118034111001.0
dna-binding proteinSJDPG12_05790Not AvailableNegative1118059 - 11182687756.51
hypothetical proteinSJDPG12_05795Not AvailablePositive1118345 - 11184554119.86
hypothetical proteinSJDPG12_05800Not AvailableNegative1118626 - 111982845800.6
dna gyrase subunit aSJDPG12_05805Not AvailableNegative1119862 - 112244196060.8
hypothetical proteinSJDPG12_05810Not AvailableNegative1122625 - 112355134494.6

Displaying genes 1021 – 1030 of 2017 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.