Porphyromonas gingivalis SJD12

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Porphyromonas

Description

Porphyromonas gingivalis SJD12 is a Gram-negative, non-motile, rod-shaped bacterium that thrives in an anaerobic environment, making it well-suited for its host-associated habitat. This organism is classified as mesophilic, with an optimal growth temperature of 37°C, which is typical for many pathogens associated with warm-blooded hosts. The bacterium possesses two membranes, a characteristic feature of Gram-negative bacteria, and it has a single replicon, indicating a streamlined genome organization. Importantly, Porphyromonas gingivalis SJD12 does not undergo sporulation, which is consistent with many anaerobes that inhabit stable environments within host organisms. In terms of its ecological role, Porphyromonas gingivalis is recognized for its association with periodontal diseases in humans, highlighting its significance in oral microbiology. As a free-living organism, it may contribute to the microbial community dynamics in the oral cavity, influencing health and disease states. The presence of flagella, despite its non-motility, suggests that it may have other functions, potentially related to its interactions within the host environment. The accession number ASYP00000000.1 provides a reference for genetic information related to this strain, facilitating further research into its biology and pathogenic potential. Understanding the traits of Porphyromonas gingivalis SJD12 can provide insights into its role in human health, particularly in relation to oral diseases and the intricate balance of the oral microbiome.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPorphyromonadaceae
GenusPorphyromonas
SpeciesPorphyromonas gingivalis
StrainSJD12

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Porphyromonas gingivalis SJD12
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonas gingivalis SJD12


Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1964 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidase s46SJDPG12_06965Not AvailableNegative1432578 - 143474081902.6
adenylate cyclaseSJDPG12_06970Not AvailableNegative1434800 - 143525517318.7
dna mismatch repair proteinSJDPG12_06975Not AvailableNegative1435279 - 143640343123.7
spooj/para/parb/repb family proteinSJDPG12_06980Not AvailableNegative1436569 - 143781647407.4
3-phosphoglycerate dehydrogenaseSJDPG12_06985Not AvailableNegative1437835 - 143875533303.3
mfs transporterSJDPG12_06990Not AvailableNegative1438856 - 143993840176.5
vi polysaccharide biosynthesis protein vipa/tvibSJDPG12_06995Not AvailableNegative1440272 - 144157948488.6
hypothetical proteinSJDPG12_07000Not AvailableNegative1441950 - 144251620646.7
phenylalanyl-trna synthetase subunit alphaSJDPG12_07005Not AvailablePositive1442668 - 144369038926.5
endonuclease iiiSJDPG12_07010Not AvailablePositive1443709 - 144438324904.4

Displaying genes 1311 – 1320 of 2017 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.