Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola sartorii |
| Strain | strain dnLKV3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1512543 bp
Thymine Count
1546585 bp
Guanine Count
1228094 bp
Cytosine Count
1161225 bp
Genome Length
5448448 bp
Protein-coding Genes
4574 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate dehydrogenase | C802_04384 | Not Available | Negative | 5191606 - 5192505 | 32319.0 |
| holliday junction atp-dependent dna helicase ruva | C802_04385 | Not Available | Positive | 5192681 - 5193274 | 21248.0 |
| hypothetical protein | C802_04386 | Not Available | Negative | 5193360 - 5194184 | 30736.9 |
| hypothetical protein | C802_04387 | Not Available | Positive | 5194202 - 5195704 | 57639.9 |
| hemolysin iii family channel protein | C802_04388 | Not Available | Positive | 5195709 - 5196344 | 23424.0 |
| anaerobic ribonucleoside-triphosphate reductase | C802_04389 | Not Available | Positive | 5196639 - 5198915 | 86151.0 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | C802_04390 | Not Available | Positive | 5198921 - 5199379 | 17387.6 |
| rip metalloprotease rsep | C802_04391 | Not Available | Negative | 5199952 - 5201295 | 50877.4 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | C802_04392 | Not Available | Negative | 5201352 - 5202500 | 42213.1 |
| hypothetical protein | C802_04393 | Not Available | Negative | 5202508 - 5203365 | 32093.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


