Phocaeicola sartorii strain dnLKV3

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola sartorii strain dnLKV3 is characterized by the presence of flagella, which may contribute to its motility and ecological adaptability. This strain contains a single replicon, indicating a streamlined genomic structure that can be advantageous for efficient replication and cellular function. The genomic data associated with this strain is cataloged under the accession number ASSP00000000.1, which can be referenced for further insights into its genetic makeup and potential applications in microbiological studies. The presence of flagella in Phocaeicola sartorii strain dnLKV3 suggests that it may possess enhanced capabilities for navigating its environment, which could be significant in its ecological niche. This motility can facilitate interactions with other microorganisms and contribute to its role in the microbiome, particularly in aquatic or marine environments where such species are typically found. Understanding these traits can provide insights into the ecological dynamics of microbial communities and the adaptive strategies employed by this strain.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola sartorii
Strainstrain dnLKV3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola sartorii strain dnLKV3 acPFj-supercont1.20.C38, whole

Gene Summary

Adenine Count

1512543 bp

Thymine Count

1546585 bp

Guanine Count

1228094 bp

Cytosine Count

1161225 bp

Genome Length

5448448 bp

Protein-coding Genes

4574 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate 5-dehydrogenaseC802_01403Not AvailableNegative1691220 - 169196027563.3
menaquinone biosynthesis methyltransferase ubieC802_01404Not AvailableNegative1691978 - 169271527741.7
phosphoribosylaminoimidazole-succinocarboxamide synthaseC802_01405Not AvailableNegative1692811 - 169375535862.0
hypothetical proteinC802_01406Not AvailableNegative1693798 - 169478136853.4
hypothetical proteinC802_01407Not AvailablePositive1694939 - 169561325035.5
trna pseudouridine synthase aC802_01408Not AvailablePositive1695648 - 169642129606.1
hypothetical proteinC802_01409Not AvailableNegative1696387 - 169715430389.5
hypothetical proteinC802_01410Not AvailableNegative1697151 - 169841948519.8
hypothetical proteinC802_01411Not AvailablePositive1698668 - 16989049085.65
fkbp-type peptidyl-prolyl cis-trans isomerase slydC802_01412Not AvailableNegative1698928 - 169950621015.5

Displaying genes 1411 – 1420 of 4647 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.