Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola sartorii |
| Strain | strain dnLKV3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1512543 bp
Thymine Count
1546585 bp
Guanine Count
1228094 bp
Cytosine Count
1161225 bp
Genome Length
5448448 bp
Protein-coding Genes
4574 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate 5-dehydrogenase | C802_01403 | Not Available | Negative | 1691220 - 1691960 | 27563.3 |
| menaquinone biosynthesis methyltransferase ubie | C802_01404 | Not Available | Negative | 1691978 - 1692715 | 27741.7 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | C802_01405 | Not Available | Negative | 1692811 - 1693755 | 35862.0 |
| hypothetical protein | C802_01406 | Not Available | Negative | 1693798 - 1694781 | 36853.4 |
| hypothetical protein | C802_01407 | Not Available | Positive | 1694939 - 1695613 | 25035.5 |
| trna pseudouridine synthase a | C802_01408 | Not Available | Positive | 1695648 - 1696421 | 29606.1 |
| hypothetical protein | C802_01409 | Not Available | Negative | 1696387 - 1697154 | 30389.5 |
| hypothetical protein | C802_01410 | Not Available | Negative | 1697151 - 1698419 | 48519.8 |
| hypothetical protein | C802_01411 | Not Available | Positive | 1698668 - 1698904 | 9085.65 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | C802_01412 | Not Available | Negative | 1698928 - 1699506 | 21015.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


