Catenovulum agarivorans DS-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Catenovulum

Description

Catenovulum agarivorans DS-2 is a bacterial strain characterized by its unique ecological niche and metabolic capabilities. This organism possesses a single replicon, indicating a streamlined genetic architecture that may contribute to its adaptability in specific environments. The genome of Catenovulum agarivorans DS-2 is accessible under the accession number ARZY00000000.1, which allows for further genomic exploration and analysis. Catenovulum agarivorans DS-2 is known to thrive in environments where agar, a polysaccharide derived from red algae, is present. This capability highlights its role in the degradation of complex carbohydrates, making it an important player in nutrient cycling within marine ecosystems. The ability to utilize agar not only signifies a specialized metabolic pathway but also suggests potential applications in biotechnology, particularly in the areas of waste management and bioremediation. In summary, Catenovulum agarivorans DS-2 exemplifies a microbe well-adapted to its ecological niche, demonstrating unique traits such as a single replicon and the capacity to degrade agar. The study of this strain can provide insights into microbial diversity and function in coastal environments, emphasizing the importance of such organisms in ecological balance and nutrient recycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusCatenovulum
SpeciesCatenovulum agarivorans
StrainDS-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Catenovulum agarivorans DS-2 contig143, whole genome shotgun

Gene Summary

Adenine Count

1345367 bp

Thymine Count

1365473 bp

Guanine Count

954210 bp

Cytosine Count

907375 bp

Genome Length

4572425 bp

Protein-coding Genes

3804 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gap repair protein with type i dna topoisomerase domainDS2_11143Not AvailablePositive2628374 - 262896721271.3
heat shock protein 90DS2_11148Not AvailablePositive2629071 - 263099372606.4
adenylate kinaseDS2_11153Not AvailablePositive2631166 - 263181023452.2
sigma-54 dependent transcription regulatorDS2_11158Not AvailablePositive2632039 - 263347553339.8
sensory box sensor histidine kinase in two-component regulatory systemDS2_11163Not AvailablePositive2633624 - 263470638703.6
two component, sigma54 specific, transcriptional regulator, fis family proteinDS2_11168Not AvailablePositive2634719 - 263605049264.1
lipoprotein nlpiDS2_11173Not AvailablePositive2636159 - 263707635377.9
extracellular metal-dependent peptidaseDS2_11178Not AvailablePositive2637082 - 263851254746.7
competence proteinDS2_11183Not AvailablePositive2638588 - 263890511285.9
hypothetical proteinDS2_11188Not AvailablePositive2639066 - 264016036567.8

Displaying genes 2231 – 2240 of 3903 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.