Thioclava atlantica strain 13D2W-2

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Thioclava

Description

Thioclava atlantica strain 13D2W-2 is a Gram-negative bacterium characterized by its rod shape. This strain possesses a single replicon, which is significant for its genetic stability and replication dynamics. The complete genomic sequence of this strain is available under the accession number AQRC00000000.1, allowing for detailed genetic and functional studies. As a member of the genus Thioclava, this strain likely plays a role in sulfur cycling within its environment, although specific ecological functions are not detailed here. The traits of Thioclava atlantica suggest its adaptation to various ecological niches, particularly those involving sulfur-rich compounds, which are common in marine environments. The presence of a single replicon in strain 13D2W-2 may indicate a streamlined genomic organization, potentially enhancing its adaptability and survival under specific environmental conditions. Understanding the genomic structure and traits of Thioclava atlantica could provide insights into microbial interactions in marine ecosystems and their contributions to biogeochemical processes. This highlights the importance of studying such microorganisms to unravel their ecological roles and potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusThioclava
SpeciesThioclava atlantica
Strainstrain 13D2W-2

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioclava atlantica strain 13D2W-2 contig47, whole genome shotgun

Gene Summary

Adenine Count

683002 bp

Thymine Count

680085 bp

Guanine Count

1277573 bp

Cytosine Count

1287783 bp

Genome Length

3928443 bp

Protein-coding Genes

3755 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDW2_06868Not AvailableNegative1421359 - 142179316695.7
flagellar motor protein motaDW2_06873Not AvailableNegative1421801 - 142267031543.8
hypothetical proteinDW2_06878Not AvailablePositive1422905 - 142405041410.4
methyltransferase type 11DW2_06883Not AvailablePositive1424054 - 142540049990.9
glycosyl transferase family proteinDW2_06888Not AvailablePositive1425397 - 142726867764.8
flagellum-specific atp synthaseDW2_06893Not AvailableNegative1427273 - 142864349303.8
flagellar basal-body rod protein flgbDW2_06898Not AvailablePositive1428709 - 142908313671.8
protein flgcDW2_06903Not AvailablePositive1429101 - 142951114823.6
flagellar hook-basal body complex protein flieDW2_06908Not AvailablePositive1429519 - 142983610978.1
flagellar biosynthesis protein fliqDW2_06913Not AvailablePositive1429853 - 14301229534.08

Displaying genes 1381 – 1390 of 3815 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.