Oceanococcus atlanticus strain 22II-S10r2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Chromatiales

Family

Oceanococcaceae

Genus

Oceanococcus

Description

Oceanococcus atlanticus strain 22II-S10r2 is characterized by a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number AQQV00000000.1, which provides a reference point for researchers seeking to explore its genetic makeup and related studies. The isolation and classification of Oceanococcus atlanticus contribute to our understanding of marine microbial communities. As a member of the broader group of oceanic microorganisms, this strain likely plays a role in nutrient cycling and may participate in the dynamics of marine ecosystems. The presence of Oceanococcus species in oceanic environments suggests their potential involvement in processes such as carbon fixation and the degradation of organic matter, contributing to the overall health and functioning of marine ecosystems. The study of Oceanococcus atlanticus strain 22II-S10r2, specifically through its genomic characteristics, can inform researchers about its ecological roles and adaptations to oceanic conditions. Understanding such traits may enhance our knowledge of microbial diversity in marine habitats and the ecological functions these organisms serve.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderChromatiales
FamilyOceanococcaceae
GenusOceanococcus
SpeciesOceanococcus atlanticus
Strainstrain 22II-S10r2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oceanococcus atlanticus strain 22II-S10r2 contig14, whole genome

Gene Summary

Adenine Count

734058 bp

Thymine Count

703081 bp

Guanine Count

1076187 bp

Cytosine Count

1138678 bp

Genome Length

3652004 bp

Protein-coding Genes

3285 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferaseATO7_08317Not AvailableNegative1832663 - 183368834558.6
outer membrane chaperone skpATO7_08322Not AvailableNegative1833692 - 183419518763.4
outer membrane protein assembly complex, yaet proteinATO7_08327Not AvailableNegative1834249 - 183654084748.1
rip metalloprotease rsepATO7_08332Not AvailableNegative1836590 - 183794549184.8
1-deoxy-d-xylulose 5-phosphate reductoisomeraseATO7_08337Not AvailableNegative1837938 - 183912841868.5
phosphatidate cytidylyltransferaseATO7_08342Not AvailableNegative1839128 - 183994329025.5
undecaprenyl diphosphate synthaseATO7_08347Not AvailableNegative1839952 - 184068627258.6
ribosome recycling factorATO7_08352Not AvailableNegative1840698 - 184125520619.9
uridylate kinaseATO7_08357Not AvailableNegative1841269 - 184200026418.0
elongation factor tsATO7_08362Not AvailableNegative1842172 - 184305630977.9

Displaying genes 1681 – 1690 of 3333 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.