Gordonia terrae C-6

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia terrae C-6 is a noteworthy bacterial strain characterized by its possession of flagella, which are structures that facilitate motility. This trait suggests that G. terrae C-6 can move in its environment, potentially aiding in its survival and colonization of various niches. The bacterium has a single replicon, indicating a streamlined genomic organization that may contribute to its efficient replication and adaptation processes. This trait is significant as it can influence the bacterium's overall adaptability to different environmental conditions. For genomic studies, the strain is cataloged under the accession number AQPW00000000.1, which provides a reference for researchers interested in further exploring its genetic characteristics and potential applications. Gordonia species, including G. terrae, are known for their ability to degrade complex organic compounds, which positions them as potential agents for bioremediation processes. Their flagellar presence and adaptability through a single replicon may enhance their ecological roles, particularly in contaminated environments where they can mobilize and metabolize pollutants. This suggests that G. terrae C-6 could be important in ecological restoration efforts, highlighting its potential utility in environmental microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia terrae
StrainC-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia terrae C-6 contig130, whole genome shotgun sequence.

Gene Summary

Adenine Count

830509 bp

Thymine Count

829149 bp

Guanine Count

1752113 bp

Cytosine Count

1758470 bp

Genome Length

5170241 bp

Protein-coding Genes

4645 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentGTC6_11731Not AvailableNegative2603198 - 260437641944.9
abc-type nitrate/sulfonate/bicarbonate transport system, permease componentGTC6_11736Not AvailableNegative2604476 - 260538732682.3
abc-type nitrate/sulfonate/bicarbonate transport system, atpase componentGTC6_11741Not AvailableNegative2605384 - 260609125734.9
cytosine deaminase-like hydrolaseGTC6_11746Not AvailableNegative2606154 - 260748846762.6
putative transcriptional regulatorGTC6_11751Not AvailablePositive2607705 - 260831021790.8
flavodoxin reductases (ferredoxin-nadph reductases) family 1GTC6_11756Not AvailablePositive2608381 - 260934634188.4
hydroxydechloroatrazine ethylaminohydrolaseGTC6_11761Not AvailablePositive2609343 - 261065344972.5
arsenite efflux pump acr3-related permeaseGTC6_11766Not AvailableNegative2610777 - 261107710562.4
putative transcriptional regulatorGTC6_11771Not AvailableNegative2611074 - 261143612761.3
hypothetical proteinGTC6_11776Not AvailableNegative2611482 - 261267242963.9

Displaying genes 2351 – 2360 of 4693 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

496 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001593L-xylo-hex-3-ulonolactoneC6H8O6Chemical structure of L-xylo-hex-3-ulonolactoneNot available
Average176.1241Da
Monoisotopic176.032087988Da

Displaying 1–10 of 496 metabolites

Health Effects

No health effects information available for this bacterium.