Pandoraea sp. SD6-2

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Pandoraea

Description

Pandoraea sp. SD6-2 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species possesses a single replicon, indicating a streamlined genomic organization. The genomic sequence of Pandoraea sp. SD6-2 is available under the accession number AQOU00000000.1. The classification of Pandoraea within the Burkholderiaceae family suggests its potential ecological roles and interactions, particularly in environments that are nutrient-rich or subject to contamination. Members of the Pandoraea genus are often isolated from various ecological niches, including soil and water, where they may contribute to biogeochemical cycles or exhibit bioremediation capabilities. Understanding the specific traits of Pandoraea sp. SD6-2 can provide insights into its ecological significance and potential applications in environmental microbiology. Its Gram-negative nature and rod shape may influence its survival and adaptability in diverse habitats, as these traits are often associated with resistance to certain environmental stresses and antimicrobial agents. Overall, the study of Pandoraea sp. SD6-2 could shed light on the complex interactions within microbial communities and its potential utility in biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusPandoraea
SpeciesPandoraea sp. SD6-2
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pandoraea sp. SD6-2


Gene Summary

Adenine Count

1080386 bp

Thymine Count

1081183 bp

Guanine Count

1797483 bp

Cytosine Count

1809195 bp

Genome Length

5768247 bp

Protein-coding Genes

5054 genes

Non-Coding Genes

169 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioredoxin-like proteinC266_00940Not AvailableNegative204016 - 20454018870.1
hypothetical proteinC266_00945Not AvailableNegative204640 - 20534125943.8
udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligaseC266_00950Not AvailablePositive205412 - 20679449431.1
esterase yqiaC266_00955Not AvailablePositive206848 - 20745922118.6
ribonuclease iiC266_00960Not AvailablePositive207537 - 20974178577.4
periplasmic protein tonbC266_00965Not AvailablePositive209735 - 21069434990.2
beta-hydroxylase, aspartyl/asparaginyl family proteinC266_00970Not AvailablePositive210786 - 21168234714.6
shikimate 5-dehydrogenaseC266_00975Not AvailablePositive211774 - 21264629936.8
monofunctional biosynthetic peptidoglycan transglycosylaseC266_00980Not AvailablePositive212656 - 21339628524.2
mechanosensitive ion channel protein mscsC266_00985Not AvailableNegative213488 - 21436331514.5

Displaying genes 341 – 350 of 5223 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.