Pandoraea sp. SD6-2

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Pandoraea

Description

Pandoraea sp. SD6-2 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species possesses a single replicon, indicating a streamlined genomic organization. The genomic sequence of Pandoraea sp. SD6-2 is available under the accession number AQOU00000000.1. The classification of Pandoraea within the Burkholderiaceae family suggests its potential ecological roles and interactions, particularly in environments that are nutrient-rich or subject to contamination. Members of the Pandoraea genus are often isolated from various ecological niches, including soil and water, where they may contribute to biogeochemical cycles or exhibit bioremediation capabilities. Understanding the specific traits of Pandoraea sp. SD6-2 can provide insights into its ecological significance and potential applications in environmental microbiology. Its Gram-negative nature and rod shape may influence its survival and adaptability in diverse habitats, as these traits are often associated with resistance to certain environmental stresses and antimicrobial agents. Overall, the study of Pandoraea sp. SD6-2 could shed light on the complex interactions within microbial communities and its potential utility in biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusPandoraea
SpeciesPandoraea sp. SD6-2
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pandoraea sp. SD6-2 contig32, whole genome shotgun sequence.

Gene Summary

Adenine Count

1080386 bp

Thymine Count

1081183 bp

Guanine Count

1797483 bp

Cytosine Count

1809195 bp

Genome Length

5768247 bp

Protein-coding Genes

5054 genes

Non-Coding Genes

169 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nicotinate-nucleotide pyrophosphorylaseC266_16865Not AvailableNegative3743850 - 374473731945.4
quinolinate synthetaseC266_16870Not AvailableNegative3744752 - 374588540658.6
fatty acid desaturase family proteinC266_16875Not AvailableNegative3745979 - 374717546020.1
small-conductance mechanosensitive channel proteinC266_16880Not AvailableNegative3747480 - 374887451000.7
fmu (sun) /eukaryotic nucleolar nol1/nop2p, trna and rrna cytosine-c5-methylaseC266_16885Not AvailableNegative3748924 - 375039353441.9
phosphoribosylglycinamide formyltransferaseC266_16890Not AvailableNegative3750390 - 375104023329.0
bifunctional riboflavin kinase/fmn adenylyltransferaseC266_16895Not AvailablePositive3751311 - 375225534727.7
isoleucyl-trna ligaseC266_16900Not AvailablePositive3752414 - 3755251106142.0
lipoprotein signal peptidaseC266_16905Not AvailablePositive3755251 - 375579319635.2
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthaseC266_16910Not AvailablePositive3755929 - 375714042908.7

Displaying genes 3391 – 3400 of 5223 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.