Pandoraea sp. SD6-2

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Pandoraea

Description

Pandoraea sp. SD6-2 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species possesses a single replicon, indicating a streamlined genomic organization. The genomic sequence of Pandoraea sp. SD6-2 is available under the accession number AQOU00000000.1. The classification of Pandoraea within the Burkholderiaceae family suggests its potential ecological roles and interactions, particularly in environments that are nutrient-rich or subject to contamination. Members of the Pandoraea genus are often isolated from various ecological niches, including soil and water, where they may contribute to biogeochemical cycles or exhibit bioremediation capabilities. Understanding the specific traits of Pandoraea sp. SD6-2 can provide insights into its ecological significance and potential applications in environmental microbiology. Its Gram-negative nature and rod shape may influence its survival and adaptability in diverse habitats, as these traits are often associated with resistance to certain environmental stresses and antimicrobial agents. Overall, the study of Pandoraea sp. SD6-2 could shed light on the complex interactions within microbial communities and its potential utility in biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusPandoraea
SpeciesPandoraea sp. SD6-2
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pandoraea sp. SD6-2 contig32, whole genome shotgun sequence.

Gene Summary

Adenine Count

1080386 bp

Thymine Count

1081183 bp

Guanine Count

1797483 bp

Cytosine Count

1809195 bp

Genome Length

5768247 bp

Protein-coding Genes

5054 genes

Non-Coding Genes

169 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ugmp family proteinC266_12720Not AvailablePositive2806659 - 280769036421.8
gtp cyclohydrolaseC266_12725Not AvailableNegative2807776 - 280858530049.9
1-deoxy-d-xylulose-5-phosphate synthaseC266_12730Not AvailableNegative2808783 - 281069668211.1
geranyltranstransferaseC266_12735Not AvailableNegative2810894 - 281179031159.1
exodeoxyribonuclease vii small subunitC266_12740Not AvailableNegative2811897 - 28121669720.61
rieske family iron-sulfur cluster-binding proteinC266_12745Not AvailablePositive2812394 - 281350943070.1
hypothetical proteinC266_12750Not AvailablePositive2813620 - 281460635285.9
3-mercaptopyruvate sulfurtransferaseC266_12755Not AvailablePositive2814765 - 281564931437.9
putative zinc transporterC266_12760Not AvailableNegative2815766 - 281660229466.9
carboxymethylenebutenolidaseC266_12765Not AvailableNegative2816800 - 281767531025.1

Displaying genes 2651 – 2660 of 5223 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.