Schaalia cardiffensis F0333

Gram-positiveNon-motileanaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Schaalia

Description

Schaalia cardiffensis F0333 is a Gram-positive, anaerobic bacterium characterized as a chemoheterotroph, indicating its reliance on organic compounds for energy while utilizing them for carbon as well. This organism possesses flagella, which are typically associated with mobility; however, it is noted that Schaalia cardiffensis F0333 does not exhibit mobility. The presence of a single replicon suggests a streamlined genomic structure, which can be advantageous for efficient replication and stability in its anaerobic environment. The accession number for this strain is AQHZ00000000.1, providing a reference for genetic and genomic studies. Understanding the traits of Schaalia cardiffensis F0333 can contribute to insights into its ecological role. As an anaerobic, chemoheterotrophic organism, it may play a significant role in nutrient cycling within its environment, particularly in anaerobic ecosystems where the breakdown of organic matter is crucial. This bacterium could be involved in processes such as fermentation or the degradation of complex organic substances, which are important for maintaining the balance of microbial communities in various habitats. Overall, the traits of Schaalia cardiffensis F0333 highlight its potential ecological significance in anaerobic environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusSchaalia
SpeciesSchaalia cardiffensis
StrainF0333

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Schaalia cardiffensis F0333 contig00042, whole genome shotgun

Gene Summary

Adenine Count

421242 bp

Thymine Count

421742 bp

Guanine Count

669622 bp

Cytosine Count

676294 bp

Genome Length

2188900 bp

Protein-coding Genes

1983 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive142 - 1681Not Available
tyrosine--trna ligaseHMPREF9004_0001Not AvailableNegative502 - 177346522.6
23s ribosomal rnaNot AvailableNot AvailablePositive2022 - 5161Not Available
argininosuccinate lyaseHMPREF9004_0002Not AvailableNegative1848 - 328451229.9
hypothetical proteinHMPREF9004_0003Not AvailableNegative3327 - 472750692.9
5s ribosomal rnaNot AvailableNot AvailablePositive5306 - 5422Not Available
argininosuccinate synthaseHMPREF9004_0004Not AvailableNegative5078 - 630144836.0
arginine repressorHMPREF9004_0005Not AvailableNegative6346 - 686118561.3
acetylornithine transaminaseHMPREF9004_0006Not AvailableNegative6858 - 816545783.1
arginine biosynthesis argjHMPREF9004_0007Not AvailableNegative8162 - 929538954.8

Displaying genes 1 – 10 of 2036 in total

Metabolites

1792 records
Metabolite IDMetabolite nameStructureCAS number
BASm0018523CDP-DG(12:0/14:0)C38H69N3O15P2Chemical structure of CDP-DG(12:0/14:0)NULL
Average869.924Da
Monoisotopic869.42039253Da
BASm0018524CDP-DG(12:0/15:0)C39H71N3O15P2Chemical structure of CDP-DG(12:0/15:0)NULL
Average883.951Da
Monoisotopic883.436042594Da
BASm0018525CDP-DG(12:0/16:0)C40H73N3O15P2Chemical structure of CDP-DG(12:0/16:0)NULL
Average897.978Da
Monoisotopic897.451692659Da
BASm0018526CDP-DG(12:0/16:1(9Z))C40H71N3O15P2Chemical structure of CDP-DG(12:0/16:1(9Z))NULL
Average895.962Da
Monoisotopic895.436042594Da
BASm0018527CDP-DG(12:0/18:0)C42H77N3O15P2Chemical structure of CDP-DG(12:0/18:0)NULL
Average926.032Da
Monoisotopic925.482992787Da
BASm0018528CDP-DG(12:0/18:1(9Z))C42H75N3O15P2Chemical structure of CDP-DG(12:0/18:1(9Z))NULL
Average924.016Da
Monoisotopic923.467342723Da
BASm0018529CDP-DG(12:0/19:1(9Z))C43H77N3O15P2Chemical structure of CDP-DG(12:0/19:1(9Z))NULL
Average938.043Da
Monoisotopic937.482992787Da
BASm0018530CDP-DG(14:0/10:0)C36H65N3O15P2Chemical structure of CDP-DG(14:0/10:0)NULL
Average841.87Da
Monoisotopic841.389092401Da
BASm0018531CDP-DG(14:0/12:0)C38H69N3O15P2Chemical structure of CDP-DG(14:0/12:0)NULL
Average869.924Da
Monoisotopic869.42039253Da
BASm0018532CDP-DG(14:0/15:0)C41H75N3O15P2Chemical structure of CDP-DG(14:0/15:0)NULL
Average912.005Da
Monoisotopic911.467342723Da

Displaying 941–950 of 1792 metabolites

Health Effects

No health effects information available for this bacterium.