Schaalia cardiffensis F0333

Gram-positiveNon-motileanaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Schaalia

Description

Schaalia cardiffensis F0333 is a Gram-positive, anaerobic bacterium characterized as a chemoheterotroph, indicating its reliance on organic compounds for energy while utilizing them for carbon as well. This organism possesses flagella, which are typically associated with mobility; however, it is noted that Schaalia cardiffensis F0333 does not exhibit mobility. The presence of a single replicon suggests a streamlined genomic structure, which can be advantageous for efficient replication and stability in its anaerobic environment. The accession number for this strain is AQHZ00000000.1, providing a reference for genetic and genomic studies. Understanding the traits of Schaalia cardiffensis F0333 can contribute to insights into its ecological role. As an anaerobic, chemoheterotrophic organism, it may play a significant role in nutrient cycling within its environment, particularly in anaerobic ecosystems where the breakdown of organic matter is crucial. This bacterium could be involved in processes such as fermentation or the degradation of complex organic substances, which are important for maintaining the balance of microbial communities in various habitats. Overall, the traits of Schaalia cardiffensis F0333 highlight its potential ecological significance in anaerobic environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusSchaalia
SpeciesSchaalia cardiffensis
StrainF0333

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Schaalia cardiffensis F0333 contig00042, whole genome shotgun

Gene Summary

Adenine Count

421242 bp

Thymine Count

421742 bp

Guanine Count

669622 bp

Cytosine Count

676294 bp

Genome Length

2188900 bp

Protein-coding Genes

1983 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive142 - 1681Not Available
tyrosine--trna ligaseHMPREF9004_0001Not AvailableNegative502 - 177346522.6
23s ribosomal rnaNot AvailableNot AvailablePositive2022 - 5161Not Available
argininosuccinate lyaseHMPREF9004_0002Not AvailableNegative1848 - 328451229.9
hypothetical proteinHMPREF9004_0003Not AvailableNegative3327 - 472750692.9
5s ribosomal rnaNot AvailableNot AvailablePositive5306 - 5422Not Available
argininosuccinate synthaseHMPREF9004_0004Not AvailableNegative5078 - 630144836.0
arginine repressorHMPREF9004_0005Not AvailableNegative6346 - 686118561.3
acetylornithine transaminaseHMPREF9004_0006Not AvailableNegative6858 - 816545783.1
arginine biosynthesis argjHMPREF9004_0007Not AvailableNegative8162 - 929538954.8

Displaying genes 1 – 10 of 2036 in total

Metabolites

1792 records
Metabolite IDMetabolite nameStructureCAS number
BASm00174952-Succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylateC14H16O9Chemical structure of 2-Succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylateNULL
Average328.2714Da
Monoisotopic328.07943211Da
BASm00175012,5-Diaminopyrimidine nucleoside triphosphateC9H18N5O14P3Chemical structure of 2,5-Diaminopyrimidine nucleoside triphosphateNULL
Average513.1856Da
Monoisotopic513.006309845Da
BASm00175042',3'-Cyclic UMPC9H11N2O8PChemical structure of 2',3'-Cyclic UMP40632-52-8
Average306.166Da
Monoisotopic306.02530185Da
BASm00175204-Methyl-5-(2-phosphoethyl)-thiazoleC6H10NO4PSChemical structure of 4-Methyl-5-(2-phosphoethyl)-thiazoleNULL
Average223.187Da
Monoisotopic223.006815015Da
BASm00175235-Carboxy-2-pentenoyl-CoAC27H42N7O19P3SChemical structure of 5-Carboxy-2-pentenoyl-CoA138149-18-5
Average893.644Da
Monoisotopic893.146902423Da
BASm0017530ADP-D-Glycero-D-manno-heptoseC17H27N5O16P2Chemical structure of ADP-D-Glycero-D-manno-heptoseNULL
Average619.3677Da
Monoisotopic619.092802865Da
BASm0017544Formamidopyrimidine nucleoside triphosphateC10H18N5O15P3Chemical structure of Formamidopyrimidine nucleoside triphosphateNULL
Average541.1957Da
Monoisotopic541.001224467Da
BASm0017551Lipoyl-AMPC18H26N5O8PS2Chemical structure of Lipoyl-AMPNULL
Average535.532Da
Monoisotopic535.096040725Da
BASm0017552MurAc(oyl-L-Ala-D-gamma-Glu-L-Lys-D-Ala-D-Ala)-diphospho-undecaprenolC86H143N7O21P2Chemical structure of MurAc(oyl-L-Ala-D-gamma-Glu-L-Lys-D-Ala-D-Ala)-diphospho-undecaprenolNULL
Average1673.0374Da
Monoisotopic1671.981227697Da
BASm0017555N2-Succinyl-L-arginineC10H18N4O5Chemical structure of N2-Succinyl-L-arginineNULL
Average274.2737Da
Monoisotopic274.127719706Da

Displaying 221–230 of 1792 metabolites

Health Effects

No health effects information available for this bacterium.