Schaalia cardiffensis F0333

Gram-positiveNon-motileanaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Schaalia

Description

Schaalia cardiffensis F0333 is a Gram-positive, anaerobic bacterium characterized as a chemoheterotroph, indicating its reliance on organic compounds for energy while utilizing them for carbon as well. This organism possesses flagella, which are typically associated with mobility; however, it is noted that Schaalia cardiffensis F0333 does not exhibit mobility. The presence of a single replicon suggests a streamlined genomic structure, which can be advantageous for efficient replication and stability in its anaerobic environment. The accession number for this strain is AQHZ00000000.1, providing a reference for genetic and genomic studies. Understanding the traits of Schaalia cardiffensis F0333 can contribute to insights into its ecological role. As an anaerobic, chemoheterotrophic organism, it may play a significant role in nutrient cycling within its environment, particularly in anaerobic ecosystems where the breakdown of organic matter is crucial. This bacterium could be involved in processes such as fermentation or the degradation of complex organic substances, which are important for maintaining the balance of microbial communities in various habitats. Overall, the traits of Schaalia cardiffensis F0333 highlight its potential ecological significance in anaerobic environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusSchaalia
SpeciesSchaalia cardiffensis
StrainF0333

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Schaalia cardiffensis F0333 contig00042, whole genome shotgun

Gene Summary

Adenine Count

421242 bp

Thymine Count

421742 bp

Guanine Count

669622 bp

Cytosine Count

676294 bp

Genome Length

2188900 bp

Protein-coding Genes

1983 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive142 - 1681Not Available
tyrosine--trna ligaseHMPREF9004_0001Not AvailableNegative502 - 177346522.6
23s ribosomal rnaNot AvailableNot AvailablePositive2022 - 5161Not Available
argininosuccinate lyaseHMPREF9004_0002Not AvailableNegative1848 - 328451229.9
hypothetical proteinHMPREF9004_0003Not AvailableNegative3327 - 472750692.9
5s ribosomal rnaNot AvailableNot AvailablePositive5306 - 5422Not Available
argininosuccinate synthaseHMPREF9004_0004Not AvailableNegative5078 - 630144836.0
arginine repressorHMPREF9004_0005Not AvailableNegative6346 - 686118561.3
acetylornithine transaminaseHMPREF9004_0006Not AvailableNegative6858 - 816545783.1
arginine biosynthesis argjHMPREF9004_0007Not AvailableNegative8162 - 929538954.8

Displaying genes 1 – 10 of 2036 in total

Metabolites

1792 records
Metabolite IDMetabolite nameStructureCAS number
BASm0034095PS(18:0/18:1(11Z))C42H80NO10PChemical structure of PS(18:0/18:1(11Z))NULL
Average790.073Da
Monoisotopic789.551984778Da
BASm0034096PS(18:1(11Z)/18:1(9Z))C42H78NO10PChemical structure of PS(18:1(11Z)/18:1(9Z))NULL
Average788.057Da
Monoisotopic787.536334714Da
BASm0034097PS(18:1(9Z)/18:1(11Z))C42H78NO10PChemical structure of PS(18:1(9Z)/18:1(11Z))NULL
Average788.057Da
Monoisotopic787.536334714Da
BASm00345312-(a-Hydroxyethyl)thiamine diphosphateC14H23N4O8P2SChemical structure of 2-(a-Hydroxyethyl)thiamine diphosphateNULL
Average469.367Da
Monoisotopic469.071182446Da
BASm0034552trans-Dodec-2-enoic acidC12H22O2Chemical structure of trans-Dodec-2-enoic acidNULL
Average198.3019Da
Monoisotopic198.161979948Da
BASm00345762Fe-2SFe2H8S6Chemical structure of 2Fe-2SNULL
Average312.11Da
Monoisotopic311.764899Da
BASm00345784Fe-4SFe4H12S8Chemical structure of 4Fe-4SNULL
Average491.96Da
Monoisotopic491.610214Da
BASm0034579beta-D-Fructofuranose 6-phosphateC6H11O9PChemical structure of beta-D-Fructofuranose 6-phosphateNULL
Average258.12Da
Monoisotopic258.015166092Da
BASm0034580Glycerone phosphateC3H5Li2O6PChemical structure of Glycerone phosphateNULL
Average181.924Da
Monoisotopic182.014382502Da
BASm00346023-Oxoadipic acidC6H8O5Chemical structure of 3-Oxoadipic acid689-31-6
Average160.1247Da
Monoisotopic160.037173366Da

Displaying 1701–1710 of 1792 metabolites

Health Effects

No health effects information available for this bacterium.